Pesticidal proteine and nucleotide sequence encoding the same
Abstract
The invention relates to a pesticidal protein and nucleotide sequence encoding the same, and which is employed for eradicating pests. According to the invention, the claimed protein is the pesticidal protein isolated during the vegetative growth stage of Bacillus cereus and Bacillus thuringiensis or analogous and active fragments thereof and which is efficient to destroy pests selected from insects, fungi insects, fungi, bacteria, nematodes, protozoan pathogens, animal parasites and the like and especially Coleoptera, Diptera, Hymenoptera, Lepidoptera, Homoptera, Hemiptera, Orthoptera, Thysanoptera, Dermaptera, Isoptera, Mallophaga, Anoplura, Siphonaptera or Trichoptera, the protein has the aminoacid sequence depicted in SEQ. ID. No:7 with a molecualr weight of 60 ...100kDa, substantially purified and is isolated in the period of time before the sporulation from the strain of Bacillus cereus AB78 with accession number NRRLB-21058, or is isolated, before the production of insecticide crystalline protein, from the strains of Bacillus thuringiensis AB6 with the accesion number NRRL B1-21060, Bacillus thuringiensis AB88, AB289, AB294. and AB359 having the accession number NRRL B-21225.NRRL B-21227, NRRL B-21229, NRRL B-21226 and also the strain of Bacillus thuringiensis AB59 and AB256 having the accession numbers NRRL-21228 and namely B-212230, all the strains being deposited at Agricultural Research Service, Patent Cuture Collection )NRRL), Northern Regional Research Center 1815, North University Street, Peoria Illinois 61604, US.

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10 claims: 2 independent, 8 dependent
- 1Proteină pesticidă izolată în timpul fazei de creștere vegetativă a unei tulpini de Bacillus spp. sau fragmentele analoge și active ale acesteia și care este capabilă să distrugă dăunători selectați dintre insecte, fungi, bacterii, nematode, protozoare patogene, paraziți ai animalelor și altele asemenea, în special, insecte din clasele Coleoptera, Diptera, Hymenoptera, Lepidoptere, Homoptera, Hemiptera, Orthoptera, Thysanoptera, Dermaptera, Isoptera, Mallophaga, Anoplura, Siphonaptera, sau Trichoptera., caracterizată prin aceea că are secvența de aminoacizi redată în SEQ.ID.N0:7, greutate moleculară, de 60...100 kDa și este izolată și purificată substanțial în perioada de dinaintea începerii sporulării din tulpina Bacillus cereus AB78 cu numărul de acces NRRL B-21058, sau este izolată înaintea producerii proteinei insecticide cristalină din tulpinile de Bacillus thuringiensis AB6 având numărul de acces NRRL B-21O6O, Bacillus thuringiensis AB88 AB289, AB294 și AB359 având numărele de acces, NRRL B-21225, NRRL B-21227, NRRL B-21229 și NRRL B-21226, precum și tulpinile Bacillus thuringiensis AB59 și AB256 cu numerele de acces NRRL B-21228 și, respectiv, B-21230, toate tulpinile fiind depuse la Agricultural Research Service, Patent Culture Collection (NRRL), Northern Regional Research Center, 1815 North University Street, Peoria, lllinois 61604, USA.
- 2Proteină pesticidă, conform revendicării 1, caracterizată prin aceea că, greutatea moleculară a acesteia este, de 100 kDa.
- 3Proteină pesticidă, conform revendicării 2, caracterizată prin aceea că, aceasta are secvența de aminoacizi redată în SEQ.ID.N0:5.
- 4Proteină pesticidă, conform revendicării 1, caracterizată prin aceea că insectele din clasa Coleoptera aparțin speciei Diabrotica.
- 5Proteină pesticidă, conform revendicării 4, caracterizată prin aceea că insectele din specia Diabrotica aparțin genului Diabrotica virgifera virgifera sau Diabrotica longicornis barberi.
- 6Proteină pesticidă, conform revendicării 1, caracterizată prin aceea că insectele din clasa de Lepidoptere aparțin speciei Agrotis.
- 7Proteină pesticidă, conform revendicării 6, caracterizată prin aceea că insectele din specia Agrotis aparțin genului Agrotis ipsilon.
- 8Secvență de nucleotide aparținând unui ADN, caracterizată prin aceea că, codifică proteina pesticidă substanțial pură, definită în revendicarea 1, conținută în tulpina de Becillus cereus AB7B și în tulpinile de Bacillus thuringiensis AB6, AB88, RO 117111 Bl AB289, AB294, AB359, AB59 și AB256, secvența de aminoacizi fiind,în principal, secvența clonei P5-4 al E. coli cu numărul de acces NRRL B-21O59 sau secvența clonei P3-12 al E.coli cu numărul de acces NRRL B-21O61, ambele fiind depuse la Agricultural Research Service Patent Culture Collection (NRRL).
- 9Secvență de nucleotide, conform revendicării 8, caracterizată prin aceea ca ea este conținută în clona pCIB6O22 a E. Coli cu numărul de acces NRRL B-21222 depusă la Agricultural Research Service, Patent Culture Collection, (NRRL), Northern Regional Research Center, 1815 North University Street, Peoria, lllinois 61604, USA.
- 10Secvența de nucleotide, conform revendicării 8, caracterizată prin aceea că aceasta este prezentată în SEQ ID N0:4.
Independent claims10
1,526 paragraphs in 173 sections, as filed
The present invention relates to a pesticide protein and nucleotide sequence that encodes it, used to control pests, insects or plants.
Harmful insects are a major factor that causes the loss of significant quantities of agricultural crops worldwide. Broad-spectrum chemical pesticides have been used extensively to combat or eradicate agricultural pests. There is, however, a substantial interest in developing new, effective alternative pesticides.
Microbial pesticides have played an important role as an alternative to chemical pest control. The most commonly used microbial product is based on Bacillus thuringiensis bacteria. Bacillus thuringiensis is a gram-positive spore that produces a crystalline insecticidal protein (known as ICP)
Numerous types of Bacillus thuringiensis are known to produce more than 25 related but different types of crystalline insecticidal protein. The crystalline insecticidal proteins formed by Bacillus thuringiensis are toxic to the larvae of certain insects of the Lepidoptera, Diptera and Coleoptera classes. In general, when the crystalline insecticidal protein is ingested by an insect, the crystal is dissolved and transformed into a toxic substance by 50% in the digestive system of the insect. However, none of the crystalline insecticidal proteins known to be active against beetle larvae have shown significant effects on the Diabrotica species, in particular, Diabrotica virgifera virgifer, western corn rootworm (WCRW) or Diabrotica longicornus barberi, vier of the root of corn.
Bacillus thuringiensis is a close relative of Bacillus cereus (Bc). A major feature that differentiates them is the lack of a parasporic crystal in Bacillus cereus.
Bacillus cereus is a widespread bacterium that is commonly found in soil and has been isolated from a variety of foods and medicines. The body has been involved in food degradation.
Although Bacillus thuringiensis has been very useful in combating harmful insects, there is a need to expand the number of potential biological agents for pest control in agriculture.
Because it has been recognized that proteins with pesticide effects can be isolated from the vegetative growth phase of Bacillus, other strains can be isolated by standardized techniques and their action tested against certain plants and harmful insects. In general, Bacillus strains can be isolated from any sample of the environment, including soil, plants, insects, silo dust and others, by methods known in the art. See, for example, Travers et al. (1987) Appl. Environ. Microbiol. 53: 1263-1266; Saleh et al. (1969) Can J. Microbiol. 15: 1101-1104; DeLucca et al. (1981) Can J. Microbiol. 27: 865-870; and Norris et al. (1981) "The geera Bacillus and Sporolactobacillus, in Starr et al. (eds.), The Prokariotes: A Handbook on Habitats, Isolation, and Identification of Bacteria, Vol. II, Springer-Verlag Berlin Heidelberg. After isolation, the strains can be tested for pesticide action during their vegetative growth. In this way, new Bacillus proteins and strains with pesticide effects can be identified.
Processes for isolating proteins are known in the art. In general, proteins can be purified by conventional chromatography, which includes gel filtration, ion exchange, and immuno-affinity chromatography, by phase chromatography.
RO 117111 High performance liquid bl, such as high performance liquid phase chromatography with inverted phase, high performance liquid chromatography with ion exchange, high performance chromatographic filtration through stationary phase of known size, chromatography focusing by hydrophobic interaction, etc., separation by electrophoresis, such as, one-dimensional gel electrophoresis, two-dimensional gel electrophoresis, etc. Such separation processes are known in the art. See for example Current Protocols in Molecular Biology, vol. 1 and 2, Ausbel et al. (eds), John Wiley & Sons, NY (1988). In addition, antibodies against proteins can be obtained on highly pure preparations thereof. See, for example, Radka et al. (1983) J. Immunol. 128: 2804; and Radka et al. (1984) Immunogenetics 19:63.
Any combination of processes can be used to purify proteins with pesticide properties. As indicated in the process, the pesticide action is determined after each purification step. 60
Such purification steps will result in a highly purified amount of protein. "Highly purified" or "substantially pure" means a protein that does not contain absolutely any compound normally associated with that protein in its natural state. The quality of the "substantially pure protein preparations" can be appreciated by the absence of other spots of the detectable protein sequences 65 following SDS-PAGE, determined visually or by densimetric scanning. On the other hand, the lack of other amino-terminal sequences or N-terminal residues in a purified preparation may indicate the degree of purity . The purity can be verified by chromatography of the "pure" preparations showing the absence of other peaks through ion exchange, inverted phase or capillary electrophoresis. The terms "substantially pure or" highly purified 70 do not exclude artificial or synthetic mixtures of proteins with other compounds. Also, the terms do not exclude the presence of minor impurities that do not interfere with the biological action of the protein and which may be present, for example, due to incomplete purification.
Some proteins are single-polypeptide sequences, while many proteins 75 contain more than one polypeptide sequence. Once the purified protein is isolated, the protein or polypeptides it is made of can be characterized and ordered by standard methods known in the art. For example, the purified protein, or the polypeptides it is made of, can be fragmented with cyanogen bromide or proteases, such as , papain, chymotrypsin, trypsin, C-lysyl endopeptidase, etc. 80 (Oike et al. (1982) J. Biol. Chem. 257: 9751-9758; Liu et al. (1983) Int. J. Pept. Protein Res. 21: 209-215). The resulting peptides are separated, preferably by HPLC, or by gel dissolution and electroabsorption on PVDF membranes, and subjected to sequential ordering of amino acids. To fulfill this task, the peptides are preferably analyzed by automatic sequence sorters. It is known that N-terminal, C-terminal or internal amino acid sequences can be determined.
It is known that proteins can vary in molecular weight, vary in the number of component peptides, in their action against pests and in other characteristics. However, by the procedures that will be shown below, active proteins 90 against a variety of pests can be isolated and characterized.
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Once the purified protein has been isolated and characterized, it is known that it can be modified in various ways, including substitutions, deletions and amino acid insertions. The processes for such manipulations are known in the art. For example, variants of pesticide protein amino acid sequences can be prepared by DNA mutations. Such variants obtained will have the desired pesticide effect. Obviously, the mutations that will be made in the DNA, encoding the variant, do not have to place the sequence outside the reading frame and, preferably, will not create complementary regions that could produce secondary mRNA structures (EP Patent Application Publication no. 75444). .
It is known that polypeptide components or protein fragments that stop the pesticide effect can be produced. These fragments include shortened sequences as well as N-terminal, C-terminal sequences, internal amino acid sequences of proteins and amino acids or deleted amino acid sequences within the proteins.
Most deleted sequences, insertions, and substitutions in protein sequences do not usually produce radical changes in pesticide protein characteristics. However, when it is difficult to predict the exact effect of substitution, deletion or insertion, before performing the operation, a person skilled in the art will appreciate that the effect is evaluated by routine sorting tests.
Good alternative methods are known for obtaining nucleotide and amino acid sequences of the present proteins. For example, to obtain the nucleotide sequence that encodes the pesticide protein, clones of the cosmid, which express an active pesticide protein, can be isolated from the genetic information of the genome. From large clones of active cosmids, smaller subclones can be created and tested for effect. In this way, clones expressing an active pesticide protein can be arranged so as to determine the nucleotide sequence of the gene. Then, an amino acid sequence can be deduced to form the protein. For general molecular donation procedures, see, for example, Molecular Cloning, A Laboratory Manual, Second Edition, vol. 1-3, Sambrook et al. (eds) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1989), and references cited here.
Pesticide genes can be optimized to have a greater effect on plants. See, for example, US Application Serial no. 07/951715; EPA 0359472; EPA 0385962; WO 91/16432; Perlak et al (1991) Proc. Natl. Acad. Sci. USA 88: 3324-3328; and Murray et al (1989) Nucleic Acids Research 17: 477-498. In this way, genes can be synthesized using plant-approved codons.
Thus the preferred codon for a particular host is the only codon most often encoding the amino acid in that host. The preferred corn codon, for example, for a particular amino acid may be derived from a known gene sequence of corn. The use of maize codon for 28 maize genes is found in the work of Murray et al. (1989), Nucleic Acids Research 17: 477-498. Synthetic genes can also be created based on the distribution of codons that a particular host uses for a particular amino acid.
In this way, nucleotide sequences can be optimized, in effect, in any plant. It is known that any part or the entire sequence of a gene can be optimized or synthesized. This means that synthetic or partially optimized sequences can also be used.
Similarly, nucleotide sequences can be optimized in any microorganism. For the use of the preferred codon of Bacillus, see for example,
US Patent no. 5024837 and Johansen et al (1988) Gene 65: 293-304.
Methodologies for constructing expression plants in plants as well as introducing foreign DNA into plants are described in the prior art. Such expression cassettes may include promoters, terminators, enhancers, driving sequences and other regulatory sequences that operate in connection with the pesticide protein coding sequence.
In general, for the introduction of foreign DNA into plants, 145 Ti plasmid vectors have been used, as well as the direct use of DNA, liposomes, electroporation, micro-injection and the use of microprojects. Such methods have been published in the specialized journals. See, for example, Guerche et al (1987) Plant Science 52: 111-116; Neuhause et al (1987) Theor. Appl. Genet. 75: 30-36; Klein et al (1987) Nature 327: 70-73; Howell et al (1980) Science 208: 1265; Horsch et al 150 (1985) Science 227: 1229-1231; DeBlock et al (1989) Plant physiology 91: 694-701; Methods for Plant Molecular Biology (Weissbach and Weissbach, eds.) Academic Press, Inc. (1988); and Methods in Plant Molecular Biology (Schuler and Zielinsky, eds) Academic Press, Inc. (1989). See also US Patent Application Serial no. 08/008374. See also EPA 0193259 and EPA 0451878A1. 155
It is understood that the method of transformation will depend on the cell of the plant to be transformed.
It is known that the components of the expression box can be modified to increase the effect of the expression. For example, shortened sequences, nucleotide substitutions or other modifications may be used. See, for example, Perlak et al (1991) 160
Proc. Natl. Acad. Sci. USA 88: 3324-3328; Murray et al (1989) Nucleic Acids Research 17: 477-498; and WO 91/16432.
The assembly may also comprise any other required regulators such as, terminators, (Guerineau etal (1991), Mol. Gen. Genet., 226: 141-144; Proudfoot, (1991), Ce //, 64: 671-674; Sanfacon etal (1991), GenesDev5: 141 -149; Mogen et 165 al (1990), PlantCell, 2: 1261-1272; Munroe etal (1990) Gene, 91: 151-158; Ballas et al (1989), Nucleic Acids Res., 17: 7891-7903; Joshi et al (1987) Nucleic Acid Res., 15: 9627-9639; translational plant sequences (Joshi, CP, (1987), Nucleic Acids Research, 15: 6643-6653), introns (Luehrsen ad Walbot, (1991), Mol.
Gender. Genet., 225: 81-93) and the like, which operate in connection with the 170 nucleotide sequence. It may be advantageous to include 12.5 cm conducting sequences (primer sequences) in the expression box assembly. Such conductive sequences may act to increase translation.
Translational leaders are known in the art and include:
- Picornavirus conductors, for example, EMCV [Encephalomyocarditis 175 5-inch non-coding region) conductor (Elroy-Stein, 0., Fuerst, TR, and Moss, B. (1989) PNAS USA 86: 6126-6130);
- Potyvirus conductors, for example, VTE [Tobacco Etch Virus - recorded tobacco virus) (Alliso et al (1986); MDMV (dwarf tobacco mosaic virus); Virology, 154: 9-20, and 180
- human immunoglobulin heavy chain (BiP) binding protein, (Macejak, DG, and Sarnow.P., (1991), Nature, 353: 90-94;
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- the untranslated conductor of the mRNA protein of the alpha-alpha mosaic virus (AMV RNA 4), (Jobling, SA., and Gehrke, L., (1987), Nature, 325: 622-625;
- conducting tobacco mosaic virus (TMV), (Gallie, DR, et al (1989), Molecular Biology of RNA, pages 237-256; and
- conducting chlorinated corn virus virus (MCMV) (Lommel, SA, et al, (1991), Virology, 81: 382-385. See also Della-Ciopa et al (1987), Plant Physiology, 84 : 965-968.
A plant terminator can be used in the expression box. See Rosenberg et al (1987), Gene 56: 125; Guerineau et al (1991) Mol. Gender. Genet. 226: 141-144; Proudfoot, (1991), Cell 64: 671-674; Sanfacon et al (1991), Genes Oev5: 141-149; Mogen etal (1990), PlantCell, 2: 1261-1272; Munroe etal (1990), Gene 91: 151-158; Ballas et al (1989), Nucleic Acids Res., 17: 7891-7903; Joshi et al (1987), Nucleic Acid Rea., 15: 9627-9639.
For tissue-specific expression, nucleotide sequences can be linked to specific tissue promoters. See, for example, US Application Serial no. 07/951715.
It is known that genes encoding pesticide proteins can be used to transform insect-sensitive organisms. Such organisms include Baculoviruses, fungi, protozoa, bacteria and nematodes.
Several ways of introducing the pesticide-expressing gene into the host microorganism are possible, under conditions that allow stable gene expression and maintenance. For example, expression cassettes including DNA assemblies of interest, operatively linked to transcriptional and translational regulatory signals for expressing DNA configurations and a homologous DNA chain with a chain of the host organism, through which integration will take place, can be constructed, and / or an identical system that is functional in the host, through which stable integration or maintenance will take place.
Transcriptional and translational regulatory signals include, but are not limited to promoters, transcriptional initiation starting positions, operators, activators, amplifiers, other regulatory elements, ribosomal binding positions, initiation codons, termination signals, and the like. See, for example, US Patent 5039523; US Patent 4853331; EPO 0480762 A2; Sambrook et al. over; Molecular Cloning, The Laboratory Manual, Maniatis et al (eds) Cold Spring Harbor Laboratory, Cold Spring Harbor, NY (1982); Advanced Bacterial Genetica, Davis et al (eds) Cold Spring Harbor, NY (198O); and the references cited in this paper.
Suitable host cells, cells containing pesticides treated to prolong the action of the toxin in the cell, when the treated cell is applied in the target pest environment, may include either prokaryotes or eukaryotes, normally being limited to those cells that do not produce toxic substances for higher organisms, such as mammals. However, organisms that produce toxic substances for higher organisms could be used where the toxin is unstable or the level of application low enough so as to avoid any possibility of intoxication of a mammal. As hosts, of particular interest will be prokaryotes and lower eukaryotes, such as fungi.
Examples of both gram-negative and gram-positive prokaryotes include Enterobacteriaceae, such as, Escherichia, Erwinia, Shigella, Salmonella, and Proteus: Bacillaceae: Rhizobiceae, such as, Rhizobium: Spirillaceae, such as, photobacterium, Zymomonas, Serratia, Aeromonas, Vibrio, Desulfovibrio, Spirillum;
RO 117111 Bl
Lactobacillaceae; Pseudomonadaceae, such as, Pseudomonas and Acetobacter; Azotobacteraceae and Nitrobacteraceae. Among eukaryotes are fungi such as Phycomycetes and Ascomycetes, which include yeasts such as Saccharomyces and Schizosaccharomyces; and yeast Basidiomycetes, such as, Rhodotorula, Aureobasidium, Sporobolomyces and the like.
Features of particular interest in the selection of the host cell for production purposes include: ease of insertion of the protein gene into the host, availability of expression systems, efficiency of expression, stability of the protein in the host, and presence of auxiliary genetic capabilities. Features of interest for use as a pesticide capsule include: the protective qualities of the pesticide cell, such as, the thick walls of the cell, pigmentation and the formation or packaging of inclusion bodies; affinity to leaves; lack of toxicity to mammals; specific attractiveness to be ingested by pests; ease of destruction and fixation without damaging the toxin. Other features include the ease of obtaining preparations containing the pesticide and their handling, the economics and stability of the storage of the preparations, etc.
Host organisms of particular interest include yeast, such as, Rhodotorula sp., Aureobasidium sp., Saccharomyces sp. and Sporobolomyces sp .; filoplane organisms such as, Pseudomonas sp., Erwinia sp. and Flavobacterium sp .; or other organisms such as Escherichia, Lactobacillus sp., Bacillus sp. and the like. Specific organisms include Pseudomonas aeurginosa, Pseudomonas fluorescens, Saccharomyces cerevisiae, Bacillus thuringiensis, Escherichia coli, Bacillus subtilis and others.
General methods for using microorganisms in the control of pesticide substances or in designing other organisms as pesticides are known in the art. See, for example, US Patent 5039523 and EP 0480762 A2.
Alternatively, pesticides are produced by introducing a heterologous gene into a host cell. Expression of the heterologous gene results, directly or indirectly, in the production and maintenance of intracellular pesticide. These cells are then treated under conditions that prolong the action of the toxin produced in the cell when the cell is applied to the target pest environment. The resulting product retains the toxin's toxicity (it naturally encapsulates it).
These naturally encapsulated pesticides can then be conditioned in the form of compositions in different preparations, in accordance with conventional techniques for application in a host-target environment, for example soil, water and plant foliage. See, for example, EPA 0192319.
The present invention relates to a pesticide protein isolated during the vegetative growth phase of a strain of Bacillus spp. or analogous and active fragments thereof and which is capable of destroying selected pests among insects, fungi, bacteria, nematodes, pathogenic protozoa, animal parasites and the like, in particular, insects of the classes Coleoptera, Diptera, Hymenoptera, Lepidoptere, Homoptera , Hemiptera, Orthoptera, Thysanoptera, Dermaptera, Isoptera, Mallophaga, Anoplura, Siphonaptera, or Trichoptera, this protein according to the invention has the amino acid sequence reproduced in SEQ.ID.N0: 7, with a molecular weight of 60-100 kDa, substantially purified and isolated during the period prior to the onset of sporulation in Bacillus cereus, namely the strain Bacillus cereus AB78 deposited under accession number NRRL B-21058 at the Agricultural Research Service, Patent Culture Collection (NRRL) , Northern
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Regional Research Center, 1815 North University Street, Peoria, IL 61604, USA or is isolated prior to the production of crystalline insecticidal protein from the strains of Bacillus thuringiensis AB6 having accession number NRRL B-21060, Bacillus thuringiensis AB88 AB289, AB294 and AB359 having accession numbers , NRRL B-21225, NRRL B-21227, NRRL B-21229, NRRL B-21226, as well as Bacillus thuringiensis strains AB59 and AB256 with accession numbers NRRL B-21228 and B-2123O, respectively All strains were submitted to the Agricultural Research Service, Patent Culture Collection (NRRL), Northern Regional Research Center, 1815 North University Street, Peoria, Illinois 61604, USA.
According to the invention, the DNA sequence encoding the substantially pure pesticide protein contained in the strain of Bacillus cereus AB78 and in the strains of Bacillus thuringiensis AB6, AB88, AB289, AB294, AB359, AB59 and AB256, is mainly the sequence of clone P5-4 of E. coli with accession number NRRL B-21O59 or the sequence of clone P3-12 of E. sheets with accession number NRRL B-21061, both of which are filed with the Agricultural Research Service Patent Culture Collection (NRRL) The nucleotide sequence is contained in clone pCIB6O22 of E schools with the accession number NRRL B-21222 filed with the Agricultural Research Service, Patent Culture Collection, (NRRL), Northern Regional Research Center, 1815 North University Street, Peoria, Illinois 61604, USA. The nucleotide sequence is presented as VIP-1 in SEQ ID N0: 4.
The advantages of the present invention are the following:
- the crystalline insecticidal protein active against the beetle larvae, obtained according to the invention, has shown significant effects on the species Diabrotîca, in particular, Diabrotîca virgifera virgifer. western corn rootworm (WCRW) or Diabrotîca longicornus barberi, northern corn rootworm;
- The protein or other polypeptide components described in the present invention can be used singly or in combination, and certain proteins of the present invention enhance the effect of pesticide proteins;
- a nucleotide sequence, isolated according to the invention, can be synthesized and used as a sample for the purpose of isolating the gene encoding the pesticide protein;
- The new strain, according to the invention, Bacillus cereus AB78, showed a significantly different spectrum of insecticidal action compared to the delta-endotoxins active on coleopters known based on Bacillus thuringiensis:
- The protein, according to the invention, has a much more selective action against beetles than the known strains of Bacillus thuringiensis active on beetles, in particular against Diabrotîca spp;
- a mixture of cells containing pCIB6203 (VIP-1 shifted and VIP-2) and cells containing pCIB6O23 (VIP-1 only) exhibit appreciable increased action against western corn rootworm.
The present invention comprises the pesticide protein, as well as its components and fragments for combating harmful plants and insects.
In particular, new pesticide proteins produced during the vegetative growth of Bacillus strains are revealed and which can be isolated in this state prior to the onset of sporulation. In the present invention, Bacillus strains, proteins and genes encoding proteins are presented. Genes encoding such proteins can be isolated, cloned and transformed into different supply vehicles for use in pest control programs.
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Although, it is known that pesticide proteins are produced during the vegetative growth of Bacillus strains, in this invention by vegetative growth is defined only that period of time before the beginning of sporulation. In the case of Bacillus thuringiensis, this vegetative growth is defined as that before the production of crystalline insecticidal protein.
In this invention, pests can be insects, fungi, bacteria, nematodes, pathogenic protozoa, parasitic liverworms and the like, but are not limited to them. Harmful insects include insects selected from the classes Coleoptera, Diptera, Hymenoptera, Lepidoptera, Mallophaga, Homoptera, Thysanoptera, Dermaptera, Isoptera, Anoplura, Siphonaptera, Trichoptera, Hemiptera, Orthoptera, etc.
Tables 1-10 provide the list of pests, associated with the crops of major importance; the list also contains pests of human and veterinary importance. Such pests are included in the scope of the present invention.
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Table 1 Lepidoptera (butterflies and moths)
Corn
Ostrinia nubilalis, (European corn drill)
Agrotis ipsilon, (black-cut worm) Helicoverpa zea, (maize spike worm) Sodoptera frugiperda, (autumn larvae of moths in stock) Diatraea grandiosella, (south-western broom of maize) Elasmopalpus of tealuselus corn ) Diatraea saccharalis, (the cane of sugar cane)
sorghum
Chilo partellus, (sorghum drill)
Spodoptera frugiperda, (autumn larvae of moths in the flock)
Helicoverpa zea, (the corn worm)
Elasmopalpus lignosellus, (dwarf drill of corn stalk)
Feltia subterranea, (the cutting worm that shatters)
Wheat
Pseudaletia unipunctata, (moth larvae in stol)
Spodoptera frugiperda, (autumn larvae of moths in the flock)
Elasmopalpus lignosellus, (dwarf drill of corn stalk)
Agrotis orthogonia, (western yellow-cut worm)
Sunflower
Suleima helianthana, (moth of the sunflower cup)
Homoeosoma electellum, (sunflower moth)
Cotton
Heliothis virescens, (cotton seed worm) Helicoverpa zea, (cotton seed worm) Spodoptera exigua, (root worm) Pectinophora gossypiella, (pink worm)
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Rice
Diatraea saccharais, (the reed of sugar cane)
Spodoptera frugiperda, (autumn worm)
Helicoverpa zea, (corn worm's worm)
Soy beans
Pseudoplusia includens, (soft worm for soy beans)
Anticarsia gemmatalis, (omida bean fodder)
Plathypena scabra, (green clover worm)
Ostrinia nubilalis, (European corn drill)
Agrotis ipsilon, (black cut off)
Spodoptera exigua, (root larvae of stol moths)
Heliothis virescens, (larva of the cotton seed moth making coconut)
Helicoverpa zea, (larva of cotton seed moth making coconut)
Barley
Ostrinia nubilalis, (European corn drill)
Agrotis ipsilon, (black cut off)
Table 2
Beetles (cockroaches)
Corn
Diabrotica virgifera virgifera, (western corn rootworm)
Diabrotica longicoris barberi, (southern corn rootworm)
Howardi undecimpuncta diabrotica, (southern corn rootworm) Melanotus spp., (Thin worm with hard body)
Cyclocephala borealis, (northern non-apparent cockroach - white larva)
Cyclocephala immacuata, (southern non-apparent beetle - white larva)
Popilia japonica, (Japanese beetle)
Chaetocnema pulicaria, (corn flea beetle)
Sphenophorus maidis, (corn beetle)
sorghum
Phyllophaga crinita, (white beetle larva)
Eleodes, Conoderus, and Aeous spp, (thin worm)
Oulema melanopus, (cereal leaf beetle)
Chaetocema pulicaria, (corn fleas)
Sphenophorus maidis, (corn beetle)
Wheat
Oulema melanopus, (cereal leaf beetle)
Hypera punctata, (clover leaf beetle)
Diabrotica udecimpunctata howardi, (Southern corn rootworm) Sunflower
Zygograma exclamationis, (sunflower beetle)
Bothyrus gibbosus, (carrot beetle)
Cotton
Anthonomus grandis (the gray cockroach that destroys the immature cotton seed shell)
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415
Rice
Colaspis brunnea (the grape beetle)
Lissorhoptrus oryzophilus (rice cockroach)
Sitophilus oryzae (rice beetle)
Soy bean
Epilachna varivestis (Mexican bean beetle)
Table 3
Homoptera (Muscles, Tiny Insects)
Corn
Rhopalosiphum maidis (the tiny insect of the corn leaf that sucks the juice of the plant) Anuraphis maidiradicis (the tiny insect of the root of corn)
sorghum
Rhopalosiphum maidis (the tiny insect of the corn leaf)
Sipha flava (the tiny yellow insect of the sugar cane)
Wheat
The tiny Russian wheat insect
Schizaphis graminum (green beetle)
Macrosiphum avenae (the tiny English wheat insect)
Cotton
Aphis gossypii (the tiny insect of cotton)
Pseudatomoscelis seriatus (fleas of cotton leaf)
Trialeurodes abutilonea (winged muscularis)
Rice
Nephotettix nigropictus (rice leaf fleas)
Soy bean
Myzus persicae (the tiny green peach insect)
Empoasca fabae (potato leaf fleas)
Barley
Schizaphis graminum (green beetle)
Rape
Brevicoryne brassicae (tiny cabbage-headed insect)
420
425
430
435
440
Table 4
445
Hemiptera (cockroaches)
Corn
Blissus leucopterus leucopterus (black cockroach sucking its juice)
sorghum
Blissus leucopterus leucopterus (black cockroach sucking its juice]
Cotton
Lyngus lineolaris (the beetle that stains plants) Rice
Blissus leucopterus leucopterus (black cockroach sucking its juice) with wings with wings white white wings which attacking attacks attacking plants planting plants
450
455
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Acrosternum hilare (the nasty green cockroach with the body of a shield)
Soy bean
Acrosternum hilare (the nasty green cockroach with the body of a shield)
Barley
Blissus leucopterus leucopterus (black cockroach with white wings attacking the plant sucking its juice)
Acrosternum hilare (the nasty green beetle with the body of a shield) Euschistus servus (the nasty brown beetle)
Table 5
Orthoptera (locusts, crickets and cockroaches)
Corn
Melanoplus femurrubrum (red-footed locust)
Melanoplus sanguinipes (migratory locust)
Wheat
Melanoplus femurrubrum (red-footed locust)
Melanoplus differentialis (locust)
Melanoplus sanguinipes (migratory locust)
Cotton
Melanoplus femurrubrum (red-footed locust)
Melanoplus differentialis (locust)
Soy bean
Melanoplus femurrubrum (red-footed locust)
Melanoplus differentialis (locust) in the household
American Periplaneta (American beetle)
Blattella germanica (German beetle)
Blatta orientalis (oriental beetle)
Table 6
Diptera (Muscles and Mosquitoes)
Corn
Hylemya platura (worms without legs - like larvae - attacking the corn seed)
Agromyza parvicornis (spotted corn leaf worm)
sorghum
Contarinia sorghicola (sorghum muscle)
Wheat
Mayetiola destructor (Hessian muscle)
Sitodiplosis mosellana (wheat moss)
American Meromyza (Wheat Stem Worm)
Hylemya coarctata (wheat root moss)
Sunflower
Neolasioptera murtfeldtiana (sunflower seed muscle)
Soy bean
Hylemya platura (corn seed worm)
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Barley
Hylemya platura (worm of corn seed) 505
Mayetiola destructor (Hessian muscle)
Insects that attack humans and animals and carry microbes Aedes aegypti (yellow fever mosquito)
Aedes albopictus (the daytime mosquito of the forest)
Phlebotomus papatasii (sand muscle)
Domestic fly (housefly)
Tabanus atratus (the black muscle of the horses)
Cochliomyia hominivorax (Muscle that enters the skin)
Thysanoptera (insect)
Corn
Anaphothrips obscurus (grass insect)
Wheat
Frankliniella fusca (tobacco insect)
Cotton
Thrips tabaci (onion insect)
Frankliniella fusca (tobacco insect)
Soy bean
Sericothrips variabilis (soy and bean insects)
Thrips tabaci (onion insect)
510
515
Table 7
520
525
Table 8
Hymenoptera (cuticles, ants, wasps, etc.) 530
Corn
Solenopsis milesta (thistle ant) Wheat
Cephus cinctus (wheat stalk cutter)
535
Table 9
Other representative species and species
Dermaptera (ears)
Auricularia (European ear)
Isoptera (termites) 540
Reticulitermes flavipes (underground eastern termite)
Mallophaga (biting lice)
Cuclotogaster heterographa (head lice)
Bovicola bovis (lice of cattle)
Anoplura (suckling lice) 545
Pediculus humanus (head and body lice)
Siphonaptera (fleas)
Ctenocephalides felis (cat fleas)
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Table 10
Mites (tiny spiders and ticks)
Corn
Tetranychus urticae (the tiny double-spotted spider) Sorg
Tetranychus cinnabarinus (the tiny red-crimson spider)
Tetranychus urticae (the tiny double-spotted spider) Wheat
Aceria tulipae (the spiral worm of wheat)
Cotton
Tetranychus cinnabarius (the tiny red-crimson spider)
Tetranychus urticae (tiny spotted double spider) Soya beans
Tetranychus turkestani (tiny spider of strawberries) Tetraychus urticae (double-spotted tiny spider) Barley
Petrobia latens (brown wheat mite)
Important mites of animals and humans
Demacentor variabilis (American dog tick) Argas persicus (poultry tick) Dermatophagoides farinae (American dust mite) Dermatophagoides pteronyssimus (European dust mite)
None of the crystalline insecticidal proteins active against known coleopteran larvae have shown significant effects on the species Diabrotica, in particular, Diabrotica virgifera virgifer, western corn rootworm (WCRW) or Diabrotica longicornus barberi, northern worm. herein refers to such pesticide proteins.
In this invention, vegetative growth is defined as that period of time before sporulation begins. In the case of Bacilius thuringiensis, this vegetative growth occurs before the production of crystalline insecticidal protein.
The present invention also comprises nucleotide sequences from microorganisms, other than Bacilius, where the denucleotide sequences are isolated by hybridization with nucleotide sequences of the Bacilius strains according to the invention. Such nucleotide sequences can be tested in pesticide action.
The invention also comprises nucleotide sequences encoding pesticide proteins.
Moreover, the invention comprises proteins obtained from organisms other than Bacilius where the protein interacts with antibodies that fight against the proteins of the invention. Also, such isolated proteins can be tested for pesticide effect by the processes disclosed in the present invention.
given the nucleotide sequences encoding the pesticide proteins of the invention, they can be manipulated and used to enhance the protein in a variety of hosts including other organisms, microorganisms and plants.
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From the amino acid sequence of the purified protein, a nucleotide sequence can be synthesized and used as a sample to help isolate the gene encoding the 595 pesticide protein.
The pesticide genes of the invention can be optimized by known methods to have an increased effect in plants.
The genes that encode such proteins can be isolated, cloned and transformed into different supply vehicles for use in 600 pest control programs.
Thus, the Bacillus microorganisms that find their use, according to the present invention, include Bacillus cereus and Bacillus Thuringiensis, as well as the other Bacillus species, listed in Table 11:
605 Table 11
List of Bacillus species
<td>Morphological group 1</td><td colspan="2">Unassigned stems</td>
<td>B. megaterium</td><td>Subgroup A</td><td></td>
<td>B. cereus *</td><td>B. apiarus *</td><td> 610</td>
<td>B. cereus var. mycoides</td><td>B. filicolonicus</td><td></td>
<td>B. thuringiensis *</td><td>B. thiaminolyticus</td><td></td>
<td>B. licheniformis</td><td>B. alkalophilus</td><td></td>
<td>B. subtilis *</td><td>Subgroup B</td><td></td>
<td>B. pumnilus</td><td>B. cirroflagellosus</td><td> 615</td>
<td>B. firmus *</td><td>B. chitinosporus</td><td></td>
<td>B. coagulans Morphological group 2</td><td>B. lentus</td><td></td>
<td>B. polymyxa</td><td>Subgroup C</td><td></td>
<td>B. macerans</td><td>B. badius</td><td> 620</td>
<td>B. circulans</td><td>B. aneurinolyticus</td><td></td>
<td>B. stearothermophilus</td><td>B. macroides</td><td></td>
<td>B. alvei *</td><td>B. freundenreichii</td><td></td>
<td>B. laterosporus *</td><td>Subgroup D</td><td></td>
<td>B. brevis</td><td>B. pantothenticus</td><td> 625</td>
<td>B. pulvifaciens</td><td>B. epiphytus</td><td></td>
<td>B. popilliae *</td><td>Subgroup E1</td><td></td>
<td>B. lentimorbus *</td><td>B. aminovorans</td><td></td>
<td>B. larvae *</td><td>B. globisporus</td><td></td>
<td>Morphological group 3</td><td>B. insolitus</td><td> 630</td>
<td>B. sphaericus *</td><td>B. psychrophilus</td><td></td>
<td>B. pastry</td><td>Subgroup E2 B. psychrosaccharolyticus</td><td></td>
<td colspan="2">* Those Bacillus strains that were previously discovered in insects.</td><td></td>
The group was formed according to Parry, JM et al. (1983) Color Atlas of 635 Bacillus species, Wolfe Medical Publications, London.
The pesticide protein, according to the invention, produced during vegetative growth, can be isolated from Bacillus strains at the times indicated by this invention. In one case, insecticidal proteins produced during vegetative growth, called VIP (insecticidal vegetative proteins) can be isolated. 640
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The proteins or other polypeptide components described in the present invention can be used singly or in combination. That is, more proteins can be used to combat various harmful insects. In addition, certain proteins of the present invention enhance the effect of pesticide proteins. These proteins are called “auxiliary proteins. While the mechanism of action is not absolutely certain, when the auxiliary proteins and pesticide proteins we are interested in are together, the insecticidal properties of the pesticide proteins are increased several times.
The pesticide proteins of the present invention may vary in molecular weight, having polypeptide components with a molecular weight of at least 30 kDa or greater, preferably about 50 kDa or greater.
Bacillus strains, according to the invention, can be used to protect pests from agricultural crops and their products. Alternatively, a gene encoding the pesticide may be introduced by a suitable vector into a microbial host, and this host may be applied to the environment or to plants or animals. Hosts of microorganisms can be selected from those that occupy the "phytosphere (phylloplane, phillosphere, rhizosphere, and / or rhizoplana) of one or more crops of interest. These microorganisms are selected so as to be able to successfully compete in a particular environment, with wild type microorganisms, to maintain and maintain stable expression of the gene expressing the polypeptide pesticide and, desirable, to provide enhanced protection. of the pesticide against its degradation and inactivation due to the environment.
Such microorganisms include bacteria, algae, fungi. Of particular interest are microorganisms such as, Pseudomonas, Erwinia, Serratia, Klebsiella, Xanthomonas, Streptomyces, Rhizobium, Rhodopseudomonas, Methylius, Agrobacterium, Acetobacter, Lactobacillus, Arthrobacter, Azotobacter, Leuconostoj fungi, and in particular alkaligen, for example, Saccharomyces, Cryptococcus, Kluyveromyces, Sporobolomyces, Rhodotoruia and Aureobasidium. Of particular interest are species of bacteria in the phytosphere, such as, Pseudomonas syringae, Pseudomonas fluorescens, Serratia marcesces, Acetobacter xilinum, Agrobacteria, Rhodopseudomonas spheroides, Xanthomonas campestris, Rhizobium melioti, Alcaligenes entrophus, Clavibacter; and yeast species from the phytosphere, such as, Rhodotoruia rubra, R. glutinis, R. marina, R. aurantiaca, Cryptococcus albidus, C. diffluens, C. laurentii, Saccharomyces rosei, S. pretoriensis,
S. cerevisiae, Sporobolomyces rosues, S. odorus, Kluyveromyces veronae and Aureobasidium polluans. Of particular interest are pigmented microorganisms.
Bacillus strains, according to the invention, or microorganisms that have been genetically modified to contain the pesticide gene and protein, can be used to protect crops and agricultural products from pests. In one aspect of the invention, the entire cell of a pesticide toxin-producing organism is treated with reagents that prolong the action of the toxin produced in the cell, when the cell is applied in the target pest environment.
The active ingredients of the present invention are normally applied in the form of compositions and can be applied on the crop surface or on the plant to be treated, simultaneously or successively with other compounds. These compounds can be either fertilizers or micronutrient donors, as well as other compositions that influence the growth of the plant. They can also be selective herbicides, insecticides, fungicides, bactericides, nematocides,
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690 molluscocides or mixtures of several such compositions, if desired, together with other acceptable carriers for agriculture, surfactants or accelerating aids commonly used in the compositions technique. Suitable carriers and adjuvants may be solid or liquid and correspond to substances commonly used in compositions technology, for example, natural or regenerated mineral substances, solvents, dispersants, wetting agents, binders or fertilizers.
Preferred methods of applying an active ingredient or agrochemical composition according to the invention, which contains at least one of the pesticide proteins produced by the bacterial strains according to the invention, are: leaf application, seed coating and soil application. The number of applications and their frequency depend on the intensity of the infestation with the corresponding pest.
In one embodiment of the invention, a Bacillus cereus microorganism has been isolated capable of destroying Diabrotica virgifera virgifera and Diabrotica longicornis barberi.
The new strain is the Bacillus cereus strain AB78 and was submitted to the Agricultural Research Service, Patent Culture Collection (NRRL), Northern Regional Research Center, 1815 North University Street, Peoria, IL 61604, USA and has accession number RRL B-21058.
A protein was substantially purified from a Bacillus cereus strain. The purification of the protein was verified by SDS-PAGE and biological action. The protein has a molecular weight of about 60 ... 100 kDa, in particular 70 ... 90 kDa, and more particularly about 80 kDa.
The amino-terminal sequence reveals the following amino acid chain: NH2-Lys-Arg-GluIle-Asp-Glu-Asp-Thr-Asp-Thr-Asx-Gly-Asp-Ser-lle-Pro- (SEQ ID N0: 8), where Asx represents either Asp or Asn. The entire amino acid chain is given in SEQ ID NO: 7.
An oligonucleotide sample was generated for the portion of the gene encoding amino acids 3-9 of the NH2- terminus. The sample was synthesized based on the delta-endotoxin gene codon from Bacillus thuringiensis (Bt). The nucleotide sequence of the oligonucleotide sample used for southern hybridization was as follows:
5'ΌΑΑ AK GAT CAA GAT ACN GAT-3 '(SEQ ID NO: 9) where N represents any base.
In addition, the DNA sample for the Bacillus cereus AB78 VIP-1 gene described in the present invention allows the sorting of any Bacillus strain or other organisms for the purpose of determining whether the VIP-1 gene (or a related gene) is naturally present or whether a particular transformed organism includes the VIP-I gene.
Examples of embodiments of the invention are given below, without limiting the invention, as are also the construction of amino acid sequences in connection with the invention, sequences which all form an integral part of the present invention and depict parts of the invention. pesticide proteins or nucleotide sequences that encode these proteins.
Example 1. Isolation and characterization of Bacillus cereus strain AB78
Bacillus cereus strain AB78 was isolated from a contaminated laboratory plate, in T3 medium (per liter: 3 g tripton, 2 g tryptose, 1.5 g yeast extract, 0.05 M sodium phosphate (pH = 6, 8], 0.005 g MnCl<sub>2</sub>; middle Travers, RS 1983). AB78 presented a significant action against the western corn rootworm. Antibiotic action against gram-positive Bacillus spp. (Table 12) was also demonstrated.
695
700
705
710
715
720
725
730
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Table 12
Antibiotic action of the culture supernatant of strain AB78
<td rowspan="2">Bacteria tested</td><td colspan="2">Inhibition zone (cm)</td>
<td>AB78</td><td>Streptomycin</td>
<td>E.coli</td><td> 0,0</td><td> 3,0</td>
<td>B.megaterium</td><td> 1,1</td><td> 2,2</td>
<td>B.mycoides</td><td> 1,3</td><td> 2,1</td>
<td>B. cereus CB</td><td> 1,0</td><td> 2,0</td>
<td>B. cereus 11950</td><td> 1,3</td><td> 2,1</td>
<td>B. cereus 14579</td><td> 1,0</td><td> 2,4</td>
<td>B. cereus AB78</td><td> 0,0</td><td> 2,2</td>
<td>Bt var. isrealensis</td><td> 1.1</td><td> 2,2</td>
<td>Bt. var tenebrionis</td><td> 0.9</td><td> 2,3</td>
The morphological characteristics of the Bacillus cereus strain AB78 are as follows: Vegetable sticks with a length of 3.1 - 5.0 mm and a width of 0.2 - 2.0 mm. Cells with round heads, single in short chains. A single subterminal, cylindrical-oval endospore formed in each cell. No parasporal crystal formation. Colonies opaque, eroded, lobed and flat. No pigment production. Motile cells. Flagella present.
The growth characteristics are as follows:
Optionally aerobic, with optimum growth temperature, 21 - 3 ° C. It grows to 15, 20, 25, 30 and 37 ° C. It does not increase at temperatures above 4 ° C. Increases in NaCl 5-7%.
Table 13 shows the biochemical profile of Bacillus cereus strain AB78.
Table 13
Biochemical characteristics of B. cereus strain AB78
<td>L-arabinose acid</td><td> -</td><td>Methylene blue reoxidized</td><td> +</td>
<td>L-arabinose gas</td><td> -</td><td>Low nitrogen</td><td> +</td>
<td>D-xylose acid</td><td> -</td><td>Nitrogen reduced to N0<sub>2</sub></td><td> +</td>
<td>D-xylose gas</td><td> -</td><td>VP</td><td> +</td>
<td>D-glucose acid</td><td> +</td><td>H<sub>2</sub>0<sub>2</sub> decomposed</td><td> +</td>
<td>D-glucose gas</td><td> -</td><td>indole</td><td> -</td>
<td>Lactose acid</td><td> -</td><td>Decomposed tyrosine</td><td> +</td>
<td>Lactose gas</td><td> -</td><td>Oihidroxiacetoa</td><td> -</td>
<td>Sucrose acid</td><td> -</td><td>Sunflower lactic acid</td><td> -</td>
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Table 13 (continued)
<td>Sucrose gas</td><td> -</td><td>Sunflower coagulated milk</td><td> -</td>
<td>D-mannitol acid</td><td> -</td><td>Sunflower Alkaline Milk</td><td> -</td>
<td>D-mannitol gas</td><td> -</td><td>Sunflower peptonised milk</td><td> -</td>
<td>Use of propionate</td><td> +</td><td>Reduced sunflower milk</td><td> -</td>
<td>Using encryption</td><td> +</td><td>Casein hydrolyzate</td><td> +</td>
<td>Hydrolyzed hyphae</td><td>W</td><td>Hydrolyzed from starch</td><td> +</td>
<td>Low methylene blue</td><td> +</td><td>Liquefied gelatin with lecithinase production</td><td>W</td>
\ N - weak reaction 780
Example 2. Bacterial cultures Subculture of Bacillus cereus strain AB78 was used to inoculate the following medium, known as "TB soup:
Tryptone ......
Yeast Glycerol Extract ......
KH2P04 .....
K2HP04 .....
pH = 7.4 g / l 785 g / l ml / l
2.1 g / l
14.7 g / l
790
After cooling, potassium phosphate was added "autoclaved soup. The containers were kept in the incubator, at 3 ° C, on a rotating vibrator, at 250 rpm, for 24 to 36 h.
The above procedure can be adapted for large users, through procedures well known in the art. 795 during vegetative growth, usually 24 ... 36 h after culture start, AB78 bacteria were centrifuged from the culture supernatant. The culture supernatant, which contains the active protein, was used in biological samples.
Example 3. Biological samples with insects
The strain of Bacillus cereus AB78 has been tested against numerous insects 800 described below.
Northern, western and southern roots of maize, Diabrotica virgifera virgifera, D. longicornis barberi and D. undecempunctata howardi: Dilutions were made from culture supernatant of strain AB78, grown 24 ... 36 h, by mixing with the liquid artificial culture medium (Marrone et al (1985) J. of Economic 805 Entomology 78: 290-293] and letting it solidify The solidified culture medium was cut and placed in the plates. Newborn larvae were placed on composition and kept at 3 ° C. After 6 ... 8 days the death of the larvae was recorded.
E. coli donated biological sample: E. coli was grown overnight in L-Amp 100, at 37 ° C. Ten ml of culture were subjected to ultrasound 3 times, 20 s, 810 each time. 500 ml of gently treated culture were added to the liquid culture medium for western rootworm of maize.
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Colorado potato beetle, Leptinotarsa decemlineata: dilutions in Triton X-1OO (to give a final concentration of 0.1% TX-1OO) were made from the culture supernatant of strain AB78, raised 24 ... 36 h 5 cm<sup>2</sup> portions of potato leaf were soaked in these dilutions, dried in air and placed on filter paper soaked in plastic plates. Newborn larvae were placed on the leaf portions and kept at 3 ° C. The death of the larvae was recorded after 3 to 5 days.
Yellow table worm, Tenebrio molitor. dilutions were made from AB78 strain culture supernatant increased 24 ... 36 h, by mixing with liquid culture medium (Bioserv # F924O) and resting for solidification. The solidified culture medium was cut and placed in plastic plates. Newborn larvae were placed on the culture medium and kept at 3 ° C. Larval mortality was recorded after 6 ... 8 days.
European corn drill, black-cut worm, tobacco bud worm, tobacco horn worm and beet worm; Ostrinia nubilalis, Agrotis ipsilon, Heliothis virescens, Manduca sexta and Spodoptera exigua respectively: dilutions, in TX-1OO (to give a final concentration of 0.1% TX-1OO), made from cultured supernatant of strain AB78 grown 24. ..36 h. 100 ml supernatant was pipetted on a surface of 18 cm<sup>2</sup> solidified culture medium (Bioserv # F924O] and allowed to air dry. The larvae in the early stages of development were then placed on the surface of the culture medium and kept at 30 ° C. Larval mortality was recorded after 3. ..6 days.
Northern houseplant, Culex pipiens: dilutions were made from culture supernatant of strain B78 grown 24 ... 36 h. 100 ml was pipetted in 10 ml water, in a 30 ml plastic cup. Three larvae were added to the water and kept at room temperature. Larval mortality was recorded after 24 ... 48 h. The spectrum of AB78 strain activity is given in table 14.
Table 14
AB78 strain culture supernatant action against different insect species
<td>Insect species</td><td>The order</td><td>The action</td>
<td>Western worm root of corn (Diabrotica virgifera virgifera)</td><td>Col</td><td> +++</td>
<td>Northern root worm of corn (Diabrotica longicornis barberi)</td><td>Col</td><td> +++</td>
<td>Southern root root of corn (Diabrotica undecimpunctata howardi)</td><td>Col</td><td> -</td>
<td>Potato beetle [Leptinotarsa decemlineata)</td><td>Col</td><td> -</td>
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Table 14 (continued)
860
<td>Insect species</td><td>The order</td><td>The action</td>
<td>Yellow table worm [Tenebrio molitor)</td><td>Col</td><td></td>
<td>European corn drill (Ostrinia nubilalis]</td><td>Lep</td><td> -</td>
<td>Tobacco worms (Heliothis virescens)</td><td>Lep</td><td></td>
<td>Worms with tobacco horns (Manduca sexta)</td><td>Lep</td><td></td>
<td>Beetle worms [Spodoptera exigua]</td><td>Lep</td><td> -</td>
<td>Black cutter worm (Agrotis ipsilon)</td><td>Lep</td><td> -</td>
<td>Northern house mosquito (Culex pipiens)</td><td> -</td><td> -</td>
865
870
The novel isolated strain, according to the invention, Bacillus cereusAB78, showed a significantly different spectrum of insecticidal action compared to delta-endotoxins active on coleopters known from Bacillus thuringiensis.
In particular, the AB7B strain, according to the invention, showed a more selective action against cockroaches, than the known strains of Bacillus thuringiensis active on beetles, in that it was more active against Diabrotica spp. The most active was against D. virgifera virgifera and D. longicornis barberi, but not against D. undecimpunctata howardi.
A number of Bacillus strains have been biologically tested for their action during vegetative growth (Table 15) against western corn root worm. The results show that the AB78 strain, according to the invention, is unique in terms of action against western rootworm of maize, which is not a general phenomenon.
Table 15
875
880
885
890
The action of culture supernatants from different strains of Bacillus spp against the western root worm
<td>Bacillus strain</td><td>Mortality percentage</td>
<td>B.cereus Ab 78 (Bat. 1)</td><td>1CO</td>
<td>B.cererus AB 78 (Bat. 2)</td><td>1OO</td>
<td>B.cererus (Carolina Bio.)</td><td> 12</td>
<td>B.cereus ATCC 11950</td><td> 12</td>
<td>B.cereus ATCC 14579</td><td> 8</td>
895
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Table 15 (continued)
<td>B. mycoides [Carolina Bio.)</td><td> 30</td>
<td>B.popillia</td><td> 28</td>
<td>B. thuringiensis HD 135</td><td> 41</td>
<td>B. thuringiensis HD 191</td><td> 9</td>
<td>B. thuringiensis GC 91</td><td> 4</td>
<td>B. thuringiensis isrealensis</td><td> 24</td>
<td>Water control</td><td> 4</td>
The specific action of strain AB78, according to the invention, against the western rootworm is shown in table 16.
Table 16
AB78 strain culture supernatant action against western rootworm of corn
<td>Culture supernatant concentration (pl / ml)</td><td>Mortality percentage</td>
<td> 100</td><td> 100</td>
<td> 25</td><td> 87</td>
<td> 10</td><td> 80</td>
<td> 5</td><td> 40</td>
<td> 2,5</td><td> 20</td>
<td> 1</td><td> 6</td>
<td> 0</td><td> 0</td>
For western root worms of maize, LC 50 was calculated to be 6.2 µl of culture supernatant per milliliter of composition.
Example 4. Isolation and purification of the active protein for maize root worm from strain AB78
The culture medium without cells and cell debris was treated at 70% saturation by adding 472 g / l of solid ammonium sulfate. The dissolution was done, at room temperature, followed by cooling in an ice bath and centrifugation, at 1OOOO xg, for 30 minutes for the precipitated proteins to appear in agglomerated form.
The supernatant was removed and the precipitate was dissolved in 1/10 of the initial volume with 20 mM TRIS-HCl buffer solution, at pH = 7.5.
The salts embedded in the precipitate were removed from the solution, either by dialysis in 20 mM TRIS-HCl solution, pH = 7.5, or by passing through a purification column.
The protein solution thus obtained was titrated, at pH = 3.5, with 20 mM sodium citrate pH = 2.5. After an incubation, for 30 minutes, at room temperature, the solution was centrifuged at 3000 xg, for 10 minutes. At this stage, the supernatant contained the highest amount of active protein.
Following the neutralization of the solution at pH = 7, O, the supernatant was passed over an anionic Mono-Q exchanger, column equilibrated with 20 mM TRIS, pH = 7.5, at a flow rate of 940, 300 ml / min. . The column was eluted with a linear and stepwise gradient, using
400 mM NaCl, in 20 mM TRIS, pH = 7.5.
The biological samples of the portions of the eluate and the SDS-PAGE analysis were used to confirm the active portions. SDS-PAGE analysis identified the biologically active protein as having a molecular weight of 80 kDa. 945
Example 5. Sequence analysis of the maize root worm active protein
The 80 kDa protein isolated by SDS-PAGE was transferred to the PVDF electrophoresis membrane and subjected to amino-terminal sequencing, performed by repeated Edman cycles on the ABI 470 liquid-pulsing computer. The transfer was performed 950 in 10 mM CAPS buffer. , with 10% methanol, pH = 11.0 as follows:
Incubation of the gel following electrophoresis was done in the transfer buffer for 5 min.
The ProBlott PVDF membrane was briefly moistened with 100% MeOH, then equilibrated in the transfer buffer. 955
The multilayer was arranged between foamy sponges and filter paper squares with the configuration of a Cathode-Gel-Membrane-Anode.
The transfer was carried out at a constant voltage of 70 V, for one hour.
After transfer, the membrane was rinsed with water and stained for 2 min with 0.25% Coomassie Blue R-250 in 50% MeOH. Dye removal was performed by 960 successive rinses with 50% MeOH, 40% water, 10% acetic acid.
After cleaning, the membrane was dried in air before extracting the strips for sequence analysis. Blott Cartridge and appropriate cycles have been used to achieve maximum efficiency and productivity. Data analysis was performed using 610 Sequence Analysis software to identify and quantify 965 PTH amino acid derivatives for each sequential cycle.
The N-terminal sequence was determined to be: NH2-Lys-Arg-Glu-lle-Asp-Glu-Asp-ThrAsp-Thr-Asx-Gly-Asp-Ser-lle-Pro- (SEQ ID NO: 8], where Asx represents Asp or Asn.
Example 6. Construction of the 970 DNA sample
An oligonucleotide sample was generated for the region of the gene encoding amino acids 3-9 of the N-terminal sequence (example 5). The sample was synthesized based on the codon role of the delta-endotoxin gene of Bacillus thuringiensis (Bt). The 5'-GAA nucleotide sequence ATT GAT CAA GAT ACN GAT-3 '(SEQ ID NO: 9) was used as a sample in southern hybridizations. The oligonucleotide was synthesized using 975 standard equipment and procedures.
Example 7. Determination of the isoelectric point of the corn rootworm active protein
The purified protein from Example 5 of the purification process was analyzed on an isoelectric focused gel 3-9 µl, using the Phastgel 980 electrophoresis system (Pharmacia). The standard operating procedures were followed by separation and staining with silver, the pl approximated to 4.9.
Example 8. PCR data on strain AB78
PCR analysis (See, for example, US Patent Application Serial No. 08/008006; Carozzi et al (1991) Appl. Environ. Microbio 1. 57 (11): 3057-3061, 985
RO 117111 Bl included herein by reference] was used to check whether the Bacillus cereus strain
AB78 did not contain any genes for the insecticidal crystalline protein of the strain
Bacillus thuringiensis or Bacillus. sphaericus (Table 17).
Table 17
Bacillus insecticidal crystalline protein gene primers tested by PCR against AB78 DNA
<td>First tested</td><td>Result product</td>
<td>2 sets specific to CrylllA</td><td>Negative</td>
<td>CrylllB</td><td>Negative</td>
<td>2 specific sets for CrylA</td><td>Negative</td>
<td>CryIA (a)</td><td>Negative</td>
<td>CrylA (b) specific</td><td>Negative</td>
<td>cryIB</td><td>Negative</td>
<td>CrylC specific</td><td>Negative</td>
<td>CrylE specific</td><td>Negative</td>
<td>2 specific sets for B.sphaericus</td><td>Negative</td>
<td>2 sets for CrylV</td><td>Negative</td>
<td>Control with Bacillus (PI-PLC)</td><td>Positive</td>
Example 9. Cloning of the entire DNA cosmid from the B. cereus strain AB78
The VIP-1 gene was cloned from all DNA prepared from strain AB78, as follows:
Isolation of DNA from strain AB78 was performed as follows:
1. Cultivation of bacteria overnight, in 10 ml solution L (Sterile centrifugal tube, 50 ml).
2. Add 25 ml of fresh L-solution and ampicillin (30 mg / ml).
3. The growth of the cells, with agitation, 2 ... 6 h, at a temperature of 3 ° C.
4. Rotate the cells in a 50 ml polypropylene tube in a clinical centrifuge IEC, at 3/4 of the speed.
5. Resuspended cell agglomeration, in 10 ml TES
6. Add 30 mg lyzozym and incubate for 2 h at 37 ° C.
7. 200 ml 20% SDS and 400 ml Proteinase K (20 mg / ml) are added. Incubate at 37 ° C.
8. Add 200 ml of fresh Proteinase K. Incubate for one hour at 55 ° C. Add 5 ml of TES (TES = 50mM, pH = 8, O, 100 mM EDTA, 15 mM NaCl) so that finally it is a volume of 15 ml.
9. It is extracted in two rows with phenol (10 ml phenol, rotated at room temperature, at 3/4 of the speed, in a clinical centrifuge type IEC). Transfer the supernatant to a clean tube fitted with a large diameter pipette.
10. It extracts 1: 1 at once. phenol: chloroform / isoamyl alcohol (ratio 24: 1).
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11. The DNA is precipitated with an equal volume of cold isopropanol; is centrifuged for plaque agglomeration of DNA.
12. The agglomerate was resuspended in 5 ml TE.
13. The DNA was precipitated with 0.5 ml 3M NaOAc, pH = 5.2 and 11 ml 95% ethanol. Store at -20 ° C for 2 hours.
14. Hook the DNA from the tube with a plastic frame, transfer it to a microfuge tube, centrifuge, pipette excess ethanol, dry in vacuo.
15. Resuspended in 0.5 ml TE. Incubate at 90 ° C for 90 minutes to help the DNA pass through the solution.
16. The concentration is determined using standard procedures.
Cloning of the AB78 stem cosmid
All procedures (unless otherwise indicated) were performed in accordance with Stratagene Protocol, Supercos 1 Instruction Manual, Cat. no. 251 301.
In general, the stages were as follows:
A. Partial restriction digestion Or 3A of the DNA of strain AB78.
B. Preparation of the DNA vector
C. DNA binding and wrapping
D. Titration of the genetic information of the cosmid
1. Prepare a culture of HB cells by placing a culture grown overnight in 5 ml of TB with 0.2% maltose. Incubate for 3.5 h at 37 ° C.
2. Centrifuge the cells and resuspend, in 0.5 ml 10 mM MgSO<sub>4</sub>.
3. Interfere:
100 ml cells
100 ml diluted coating mixture
100 10 mM MgSO<sub>4</sub> ml TB
4. It is absorbed at room temperature for 30 minutes without stirring.
5. Add 1 ml TB and mix gently. Incubate for 30 minutes at 37 ° C.
6. Spread 200 ml on the L-amp plates. Incubate overnight at 37 ° C.
At least 400 clones of the cosmid were selected for action against the western corn root worm described in Example 3. DNA from 5 active clones and 5 inactive clones was used in southern hybridization. The results demonstrated that the hybridization using the oligonucleotide sample described above is correlated with the action of the western root root of the corn (Table 18).
Clones of cosmid P3-12 and P5-4 were submitted to the Agricultural Research Service Patent Culture Collection (NRRL) and were given access numbers B-21061 and B-21059, respectively.
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Table 18
Action of clones of the AB78 stem cosmid against the western corn root worm
<td>clone</td><td>Average percentage of mortality (N = 4)</td>
<td>Clones that hybridize with the sample</td><td></td>
<td>P1-73</td><td> 47</td>
<td>P1-83</td><td> 64</td>
<td>P2-2</td><td> 69</td>
<td>P3-12</td><td> 85</td>
<td>P5-4</td><td> 97</td>
<td>Clones that do not hybridize with the sample</td><td></td>
<td>P1-2</td><td> 5</td>
<td>P3-8</td><td> 4</td>
<td>P3-9</td><td> 12</td>
<td>P3-18</td><td> 0</td>
<td>P4-6</td><td> 9</td>
Example 10. Identifying a 6 kb Active Region Against Western Root Corn Worm
DNA from P3-12 was partially digested with the restriction enzyme or 3A, and bound in the pUCI9 vector of E. coli and transformed into lysates. An 80 kDa protein-specific DNA sample was synthesized by PCR amplification of a portion of P3-12 DNA. The oligonucleotides MK113 and MK117, which hybridize to VIP-1 portions, were synthesized by using the partial amino acid sequence of the 80 kDa protein. Plasmid subclones were identified by colony hybridization of the PCR sample and tested for their action against western rootworm. One of these clones, PL2, hybridizes to the PCR fragment and is active against the western root corn worm, according to the biological sample described above.
A 6kb Cla I restriction fragment from PL2 was cloned into Sma I of the pHT31O1 oscillatory vector of E. coli-Bacillus (Lereclus, D. et al, 1989, FEMS Microbiology Letters 60: 211-218) to obtain pCIB6201. This configuration confers western root root worm anti-worm action on both Bacillus and coli strains, in any orientation.
pCIB6O22 contains the same 6 kb Cla I fragment in pBluescript SK (+) (Stratagene), produces the equivalent VIP-1 protein, and is also active against western corn rootworm.
The nucleotide sequence of pCIP6O22 was determined by Stanger's dideoxy termination method, Proc. Natl. Acad. Sci. USA, 74: 5463-5467 (1977), using PRISM Ready Reaction Dye Deoxy Terminator Cycle Sequencing Kits and PRISM Sequenase Terminator Double-StrandedADN Sequencing Kit and analyzed on the ABI 373 automatic computer. The sequence is given in SEQ ID NO: I comprising SEQ ID NO: 4 encoding VIP-1 protein, of 1OOkDa defined in the sequence SEQ ID N0: 5.
RO 117111 Bl pCIB6O22 was filed with the Agricultural Research Service, Patent Culture
Collection, (NRRL), Northern Regional Research Center, 1815 North University 1110
Street, Peoria, Illinois 61604, USA, and was given access number NRRL B-21222.
Example 11. Functional dissection of the VIP-1 region of DNA
To confirm the need for the VIP-1 open reading frame (ORF) for insecticidal action, a mutation was created in the gene. Bgl II restriction enzyme recognizes a single locus located 1758 bp in the coding region of VIP-1. pCIB6201 1115 was digested with Bgl II and single-stranded ends filled with DNA polymerase (Klenow fragment) and dNTPS.PIasmida was relegated and transformed into E. coli. The resulting plasmid, pCIB6203, contains a 4-nucleotide insert in the coding region of VIP-1.
pCIB6203 does not confer insecticidal action, confirming that VIP-1 is an 1120 essential component of the action of the western corn rootworm.
To further define the region required for VIP-1 coding, subclones of VIP-1 and VIP-2 (auxiliary protein) regions were constructed and tested for their ability to complete the mutation in pCIB6203.
pCIB6023 contains the 3.7 kb Xba I-EcoRV fragment in pBluescript SK (+) 1125 (Stratagene). Western blot analysis indicates that pCIB6023 produces VIP-1 protein in the same amount and size as clones PL2 and pCIB6022.
pCIB6023 contains the entire 80 kd protein gene.
pCIB6023 was submitted to the Agricultural Research Service, Patent Culture Collection, (NRRL), Northern Regional Research Center, 1815 North University 1130 Street, Peoria, Illinois 61604, USA, and was given accession number NRRL B-21223.
pCIB6O23 presents some action. However, the level of action is lower than that of pCIB6022. A mixture of cells containing pCIB6203 (VIP-1 shifted and VIP-2) and cells containing pCIB6023 (VIP-1 only) exhibit increased action against western corn rootworm. Thus, pCIB6023 must produce 1135 VIP-1 functional genetic product and pCIB6203 must produce VIP-2 functional genetic product. These results suggest an additional demand for a genetic product from the VIP-2 region, in combination with VIP-1, to confer maximum action against western corn rootworm. (See Table 19).
Table 191140
Characterization of pCIB 6022 cxsmb vn »irv c
1
JOOlp
1-----------------------------------------------------------------------------1
IT
<img file="RO117111B1_D0001.tif" />
J
<td>Test configurations</td><td colspan="2">Action against WCRW</td>
<td>pCIB6022</td><td> +++</td><td> 1145</td>
<td>pCIB6023</td><td colspan="2"> +</td>
<td>PCIB6203</td><td></td><td> 1150</td>
pCIB6203 pCIB6023 +++
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The framed regions represent the amount of VIP-1. Light colored portions indicate the regions encoding the 80 kDa peptide observed in Bacillus. The dark-colored portions represent the N-terminal amino acids established in the DNA sequence of VIP-1.
Arrows represent configurations transcribed by the beta-galactosidase promoter.
Restriction places: C-Cla; X-Xba I; S-Sca I; Rl-Eco Rl; B-Bgl II; RV Eco RV.
Example 12. Antibody production of strain AB78
Antibody production was initiated in two Lewis strain rats to allow both of them to produce hybridoma cell lines and also to produce sufficient serum for limited selection of cDNA information. Another factor was the very limited amount of antigen available and the fact that it could be purified only by PAGE and then by electrotransfer on nitrocellulose.
Due to the limited availability of the antigen on nitrocellulose, the latter was emulsified in DMSO and injected into the hind paws of the animals to promote B-cell production in the popliteal lymph nodes just above. A serum with strong reaction was produced by western analysis in the first production obtained by bleeding. Several consecutive injections and bleeding produced enough serum to make the necessary selection.
Then, hybridoma production was initiated with one of the rats. The popliteal lymph nodes were extracted, macerated and the resulting cells were mixed with myeloma mouis P3x63Ag8,653. Further cell selection was performed as described below. Four initial sources were selected to be agitated giving the strongest emulsified antigen reaction at limited dilution donation. Ten additional sources were chosen for expression and cold storage.
Procedure for emulsifying the AB78 strain on nitrocellulose in DMSO for ELISA type selection:
After electrotransferring the samples of the AB78 strains and transferring them by PAGE into nitrocellulose, the reversible strain Ponceanus is used to visualize all the transferred proteins.
The toxin band corresponding to strain AB78, previously identified and ordered Nterminal, is identified and extracted from nitrocellulose. Each strip has a size of 1 mm x 5 mm in order to minimize the amount of emulsified nitrocellulose. A single tape is placed in a centrifugal tube with 250 µl of DMSO and macerated with a plastic gun (Kontes, Vineland, NJ). To help emulsify, the DMSO mixture is heated for 2 to 3 minutes. , the temperature of 37 ... 45 ° C. 0 further maceration may be required after heating; however, all nitrocellulose should be emulsified. Once emulsified, sample AB78 is placed on ice. In microtiter preparation, the plate is coated with emulsified antigen and the sample should be diluted in borate saline buffer solution as follows: 1: 5, 1:10, 1:15, 1:20, 1:30, 1: 5O, 1: 100 and O. The coating antigen should be prepared immediately before use.
ELISA Protocol;
1. Coating with AB78 / DMS0 in BBS. Incubation overnight, at a temperature of 4 ° C.
2. Wash the 3X plate with 1X ELISA wash buffer.
3. Hold for 30 minutes at room temperature (1% BSA & 0.05% Tween 20 in BPS).
4. Wash the 3X plate with 1X ELISA wash buffer.
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5. Add rat serum. Incubate at 37 ° C.
6. Wash the 3X plate with 1X ELISA wash buffer.
7. An anti-rat rat prepared with a concentration of 2 pg / ml in diluent ELISA is added. Incubate for one hour at 37 ° C.
8. Wash the 3X plate with 1X ELISA wash buffer.
9. Add anti-goat alkaline phosphatase prepared in rabbit with concentration 2 pg / ml in ELISA diluent.
10. 3X wash with 1X ELISA wash buffer.
11. Substrate is added. Incubate for 30 minutes at room temperature.
12. After 30 minutes the incubation with NaOH 3N solution is stopped.
Example 13. Activation of insecticidal action of inactive Bacillus thuringiensis strains using AB78 VIP clones
By adding pCIB6203 to the culture supernatant of a Bacillus thuringiensis GC91 strain, 100% mortality of Diabrotica virgifera virgifera occurs. Taken separately, neither pCIB6203 nor GC91 are active against Diabrotica virgifera virgifera. The data are presented below:
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<td>The material tested</td><td>Mortality in percentage of Diabrotica</td>
<td>PCIB62O3</td><td> 0</td>
<td>GC91</td><td> 16</td>
<td>+ GC91 PCIB62O3</td><td> 100</td>
<td>Control</td><td> 0</td>
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Example 14. Isolation and biological action of B. cereus strain AB81
A second Bacillus cereus strain, called ΑΒΘ1, was isolated from silo dust samples using standard methodologies. A subculture of strain AB81 was grown and prepared to be the biological sample, as described in example 2. The biological action was evaluated, as described in example 3. The results are as follows:
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<td>Insect species tested</td><td>Mortality percentage</td>
<td>Ostrinia nubilalis</td><td> 0</td>
<td>Aggrieved YES</td><td> 0</td>
<td>Diabrotica virgifera virgifera</td><td> 55</td>
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Example 15. Isolation and biological action of B. thuringiensis strain AB6
A Bacillus thuringiensis strain, named AB6, was isolated from silo dust samples by standard methods known in the art. A subculture of strain AB6 was grown and prepared for biological testing as described in Example 2. Half of the sample was autoclaved for 15 min to test for beta-exotoxin.
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RO 117111 Bl
The biological action was evaluated as described in Example 3.
The results are as follows:
<td>Insect species tested</td><td>Mortality percentage</td>
<td>Ostrinia nubilalis</td><td>A</td>
<td>Aggrieved YES</td><td>1OO</td>
<td>Agrotis ipsilon [autoclaved sample]</td><td> 0</td>
<td>Diabrotica virgifera virgifera</td><td> 0</td>
The AB6 strain was submitted to the Agricultural Research Service, Patent Culture Collection (NRRL), Northern Regional Research Center, 1815 North University Street, Peoria, Illinois 61604, USA, and has accession number NRRL B-21O6O.
Example 16. Isolation and biological action of B. thurigiensis strain AB88 The strain Bacillus thuringiensis, termed AB88, was isolated from silage dust samples by standard methods. A strain strain AB88 was grown and prepared for biological testing, as described in Example 2. Half of the sample was autoclaved for 15 min to test for beta-toxin. The biological action was evaluated against a number of insect species described in Example 3. The results are as follows:
<td rowspan="2">Insect species tested</td><td rowspan="2">Class</td><td colspan="2">Percentage mortality of the culture supernatant</td>
<td>Neautoclavat</td><td>autoclave</td>
<td>Aggrieved YES</td><td>Lepidoptera</td><td> 100</td><td> 5</td>
<td>Ostrinia nubilalis</td><td>Lepidoptera</td><td> 100</td><td> 0</td>
<td>Spodoptera frugiperda</td><td>Lepidoptera</td><td> 100</td><td> 4</td>
<td>Helicoverpa zea</td><td>Lepidoptera</td><td> 100</td><td> 12</td>
<td>Heliothis virescens</td><td>Lepidoptera</td><td> 100</td><td> 12</td>
<td>Leptinotarsa decemlineata</td><td>beetles</td><td> 0</td><td> 0</td>
<td>Diabrotica virgifera virgifera</td><td>Coleoptera</td><td> 0</td><td> 5</td>
The delta-endotoxin crystals were purified from strain AB88 by standard methods. No action on the part of the pure crystals was observed against
Agrotis ipsilon, when tested biologically.
RO 117111 Bl
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Example 17. VIP purification from strain AB88
Bacterial fluid culture was increased overnight at 3 ° C in TB medium. The cells were removed and the supernatant was kept. The proteins were precipitated with ammonium sulphate (70% saturation), centrifuged and the sediment thus obtained was preserved. The sediment was resuspended in the initial volume of 20 mM Tris, pH = 7.5 and dialyzed on the same buffer. The dialysate of strain AB88 is more turbid than other comparable material obtained from strain AB78. AB88 strain proteins were separated after clarification by several different methods, including isoelectric focusing (Rotofor, BioRad, Hercules, CA), precipitation at pH = 4.5, ion exchange chromatography, stationary phase chromatography and ultrafiltration .
The active protein against the European corn borer remained in the sediment obtained by precipitating the dialysate, at pH = 4.5. When the preparative IEF was made on dialysis, using ampholytes pH = 3 ... 1O, the insecticidal action of ECB was found in all fractions with pH value 7 or higher.
SDS-PAGE of these fractions showed approximately equal molecular weight protein bands, with 60 kDa and about 80 kDa. The 60 kDa and 80 kDa bands were separated by HPLC ion exchange on a Poros-Q column (PerSeptive Biosystems, Cambridge, MA). The N-terminal sequence was obtained from two fractions containing slightly different molecular mass proteins, but both having a size of about 60 kDa. The sequences obtained are similar, both with each other and with some delta-endotoxins.
Anion exchange fraction 23 (lower): xEPFVSAxxxQxxx (SEQ ID NO: 10)
Anion exchange fraction 28 (higher): xEYENVEPFVSAx (SEQ ID NO: 11) When the (active) sediment with pH = 4.5 was further separated by anion exchange on a Poros-Q column, the action was found only in fractions with a major band, about 60 kDa.
The active protein against the black cutter worm also remained. in the sediment, when the dialysate of strain AB88 was lowered, to pH = 4.5.
Using ampholite pH = 3 ... 10 in the preparative IEF, the action was not detected in the ECB-active IEF fractions; instead, it had a larger fraction, pH = 4.5 ... 5.0.
Its major compounds have molecular weights of approximately 35 and 80 kDa.
The sediment, with pH = 4.5 was separated by exchange of HPLC anions in fractions containing only the material, of 35 kDa and fractions containing, both bands, of 35 kDa and 80 kDa.
Example 18. VIP characterization of strain AB88
Fractions containing the various plant proteins active against Lepidopterans were generated as described in Example 17. Analysis of the active fractions showed that different VIPs are responsible for the action against different species, by Lepidopterans.
The action of Agrotis ipsilon is due to a protein, 80 kDa or 35 kDa, which is single or in combination. These proteins are not related to any of the delta-endotoxins Bacillus thuringiensis, as evidenced by the lack of sequence homology to the known delta-endotoxin sequences. Also, these proteins are not found in the delta-endotoxin crystal AB88. The N-terminal sequences of major delta-endotoxins were compared with the N-terminal sequences of VIPs, 80 kDa and 35 kDa, and no sequence homology was found. The summary of results is as follows:
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RO 117111 Bl
<td>Agrotis VIP N-terminal sequences</td><td>N-terminal sequence of major proteins endotoxins</td>
<td>80 kDa</td><td>130 kDa MDNNPNINE (SEQ ID NO: 14) 80 kDa</td>
<td>MNKNNTKLPTRALP (SEQ ID NO: 12]</td><td>MDNNPNINE (SEQ ID NO: 15) 60 kDa</td>
<td>35 kDa ALSENTGKDGGYIVP [SEQ ID NO: 13)</td><td></td>
The action of Ostriniei nubilalis is due to a VIP of 60 kDa and the action of the Spodoptera frugiperda is due to a VIP of unknown size.
Bacillus thuringiensis strain AB88 was submitted to the Agricultural Research Service, Patent Culture Collection (NRRL), Northern Regional Research Center, 1815 North University Street, Peoria, Illinois 61604, USA and has accession number NRRL B-21225.
Example 19. Isolation and biological action of other Bacillus species
Other Bacillus species have been isolated that produce insecticidal proteins during vegetative growth. These strains were isolated from environmental samples by standard methods. The isolated strains were prepared for biological study and then tested as described in Examples 2 and 3 respectively. Isolated strains that produced insecticidal proteins during vegetative growth, with action against Agrotis ipsilon, are given in the table below:
<td>Bacillus isolated</td><td>Presence of deltaendotoxin crystal</td><td>Mortality percentage</td>
<td>AB6</td><td> +</td><td> 100</td>
<td>AB53</td><td> -</td><td> 80</td>
<td>AB88</td><td> +</td><td> 100</td>
<td>AB195</td><td> -</td><td> 60</td>
<td>AB211</td><td> -</td><td> 70</td>
<td>AB217</td><td> -</td><td> 83</td>
<td>AB272</td><td> -</td><td> 80</td>
<td>AB279</td><td> -</td><td> 70</td>
<td>AB289</td><td> +</td><td> 100</td>
<td>AB292</td><td> +</td><td> 80</td>
<td>AB294</td><td> -</td><td> 100</td>
<td>AB300</td><td> -</td><td> 80</td>
<td>AB359</td><td> -</td><td> 100</td>
RO 117111 Bl
Isolated strains AB289, AB294 and AB359 were submitted to Agricultural
Research Service, Patent Culture Collection (NRRL), Northern Regional Research 1370
Center, 1815 North University Street, Peoria, Illinois 61604, USA, and have access numbers NRRL B-21227, NRRL B-21229 and NRRL B-21226, respectively.
Bacillus strains that produce insecticidal proteins during vegetative growth, with action against Diabrotica virgifera virgifera are given in the table below. 1375
<td>Bacillus isolated</td><td>Presence of deltaendotoxin crystal</td><td>Mortality percentage</td>
<td>AB52</td><td> -</td><td> 50</td>
<td>AB59</td><td> -</td><td> 71</td>
<td>AB68</td><td> +</td><td> 60</td>
<td>AB78</td><td> -</td><td> 100</td>
<td>AB122</td><td> -</td><td> 57</td>
<td>AB218</td><td> -</td><td> 64</td>
<td>AB256</td><td> -</td><td> 64</td>
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Isolated strains AB59 and AB256 were submitted to the Agricultural Research Service, Patent Culture Collrctio (NRRL), Northern Regional Research Center, 1815 North University Street, Peoria, Illinois 61604, USA, and have accession numbers NRRL B-21228 and B- respectively. 21230.
The following warehouses were established at the Agricultural Research Service, Patent Culture Collection (NRRL), Northern Regional Research Center, 1815 North University Street, Peoria, Illinois 61604, USA:
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<td>1. E. coli PL 2</td><td colspan="2">no. access NRRL B-21221</td>
<td>2. E. coli pCIB 6022</td><td>no. access NRRL B-21222</td><td> 1395</td>
<td>3. E. coli pCIB 6023</td><td>no. access NRRL B-21223</td><td></td>
<td>4. Bacillus thuringiensis HD73-78 VIP</td><td>no. access NRRL B-21224</td><td></td>
<td>5. Bacillus thuringiensis AB88</td><td>no. access NRRL B-21225</td><td></td>
<td>6. Bacillus thuringiensis AB359</td><td>no. access NRRL B-21226</td><td></td>
<td>7. Bacillus thuringiensis AB289</td><td>no. access NRRL B-21227</td><td> 1400</td>
<td>8. Bacillus sp. AB59</td><td>no. access NRRL B-21228</td><td></td>
<td>9. Bacillus sp. AB294</td><td>no. access NRRL B-21229</td><td></td>
<td>10. Bacillus sp. AB256</td><td>no. access NRRL B-21230</td><td></td>
<td>11. E. coli P 5-4</td><td>no. access NRRL B-21059</td><td></td>
<td>12. E. coli P 3-12</td><td>no. access NRRL B-21061</td><td> 1405</td>
<td>13. Bacillus cereus AB78</td><td>no. access NRRL B-21058</td><td></td>
<td>14. Bacillus thuringiensis AB6</td><td>no. access NRRL B-21060</td><td></td>
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List of pesticide protein sequences (1) General information:
(1) Owner: CIBA-GEIGY AG, CH-4OO2 Klybeckstrasse 191, Basel, Switzerland (A) Inventors: Gregory W. Warren, USA; Michael G. Koziel, USA; Martha A. Mullins, USA; Gordon J. Nye, USA; Brian Carr, USA; Nalini Manaj Desai, USA and N. Kristy Kostichka, USA.
(ii) Title of the invention: New pesticide proteins and varieties (iii) Number of sequences: 18 (vi) Date of priority of the application:
(A) No. Application: US O8 / O37O57; (B) Date of filing: March 25, 1993 (2) Information for SEQ ID NO: 1:
(i) sequence characteristics:
(a) length: 6106 base pairs (b) type: nucleic acid (c) winding: simple (d) topology: linear (ii) molecule type: DNA (genomic) (vi) original source:
(a) organism: Bacillus cereus (b) variety: AB78 (c) individual isolate: NRRL B-21058 (ix) characteristics:
(a) name / key: CDS (b) location: 1082 ... 1810 (d) other information: / product = "VIP-2" / label = orf-1 (ix) characteristics:
(a) name / key: CDS (b) location: 1925 ... 2470 (d) other information: / product = 'vip-2 / label = orf-2 (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 1:
ATCGATACAA TGIIGI11 IA CTTAGACCGG TAGTCTCTGT AATTTGTTTA ATGCTATATT 60
CTTTACTTTG ATACATTTTA ATAGCCATTT CAACCTTATC AGTATGTTTT
TGTGGTCTTC120
CTCCTTT111 TCCACGAGCT CTAGCTGCGT TTAATCCTGT TTTGGTACGT
TCGCTAATAA180
TATCTCTTTC TAATTCTGGA ATACTTGCCA TCATTCGAAA GAAGAATTTC CCCATAGCAT 240
TAGAGGTATC AATGTTGTCA TGAATAGAAA TAAAATCTAC ACCTAGCTCT TTGAATTITT 300
CACTTAACTC AATTAGGTGT TTTGTAGAGC GAGAAATTCG ATCAAGTTTG TAAACAACTA
360
RO 117111 Bl
TCTTATCGCCTTTACGTAAT ACTTTTAGCA ACTCTTCGAG TTGAGGGCGC TCTTI A IA 420
TTCCTGTTAT TTTCTCCTGA TATAGCCTTT CTACACCATA TTGTTGCAAA GCATCTATT480 GCATATCGAG ΑΓΙ ΙIGTICTTCTGTGCTGA CACGAGCATA ACCAAAAATC AAAKGGTTT 540
CACTTCCTAT CTAAATATAT CTATTAAAAT AGCACCAAAA ACCTTATTAA ATTAAAATAA
600
GGAACTTTGT TTTTGGATAT GGATTKGGT ACTCAATATG GATGAGTTTT TAACGCTTTT
660
GTTAAAAAAC AAACAAGTGC CATAAACGGT CGI Π II GGG ATGACATAAT AAATAATCTG 720
TTTGATTAAC CTAACCTTGT ATCCTTACAG CCCAGTTTTA TTTGTACTTC AACTGACTGA
780
ATATGAAAAC AACATGAAGG TTTCATAAAA ΠΤΑΤΑΤΑΚ KCCATAACG GATGCTCTAT 840
CTTTAGGTTA TAGTTAAATT ATAAGAAAAA AACAAACGGA GGGAGTGAAA
AAAAGCATCT 900
TCTCTATAAT TTTACAGGCT CTTTAATAAG AAGGGGGGAG ATTAGATAAT AAATATGAAT 960
ATCTATCTAT AATTGTTTGC KCTACAATA ACTTATCTAA CTTTCATATA CAACAACAAA 1020
ACAGACTAAA TCCAGAKGT ATAKCAKT TCAGKGKC CKTATAAAA TAATTTCATA 1080
ATG AAA AGA ATG GAG GGA AAG KG KT ATG GTG TCA AAA AAA TTA1126
Met Lys Arg Met Glu Gly Lys Leu Phe Met Val Ser Lys Lys Leu 15 1015
CAA GTA GTT ACT AAA ACT GTA TTG CTT AGT ACA GTT TTC TCT ATA TCT 1174
Gin Val Val Thr Lys Thr Val Leu Leu Ser Thr Val Phe Ser lle Ser
2530
TTA TTA AAT AAT GAA GTG ATA AAA GCT GAA CAA TTA AAT ΑΤΑ AAT TCT 1222
Leu Leu Asn Asn Glu Val lle Lys Ala Glu Gin Leu Asn lle Asn Ser
4045
CAA AGT AAA TAT ACT AAC KG CAA AAT CTA AAA ATC ACT GAC AAG GTA 1270
Gin Ser Lys Tyr Thr Asn Leu Gin Asn Leu Lys lle Thr Asp Lys Val
5560
GAG GAT TTT AAA GAA GAT AAG GAA AAA GCG AAA GAA TGG GGG AAA GAA 1318
Glu Asp Phe Lys Glu Asp Lys Glu Lys Ala Lys Glu Trp Gly Lys Glu
70 75
AAA GAA AAA GAG TGG AAA CTA ACT GCT ACT GAA AAA GGA AAA ATG AAT 1366
Lys Glu Lys Glu Trp Lys Leu Thr Ala Thr Glu Lys Gly Lys Met Asn
85 90 95
AAT KT KA GAT AAT AAA AAT GAT ATA NAG ACA AAT TAT AAA GAA AK 1414
Asn Phe Leu Asp Asn Lys Asn Asp lle Xaa Thr Asn Tyr Lys Glu lle
100 105 110
1455
1460
1465
1470
1475
1480
1485
1490
1495
RO 117111 Bl
1462
1510
1558
1606
1654
1702
1750
1798
ACT TTT TCT ATG GCA GGC TCA TTT GAA GAT GAA ATA AAA GAT TTA AAA
Thr Phe Ser Met Ala Gly Ser Phe Glu Asp Glu Ile Lys Asp Leu Lys
115 120125
GAA ATT GAT AAG ATG TTT GAT AAA ACC AAT CTA TCA AAT TCT ATT ATC
Glu Hair Asp Lys Met Phe Asp Lys Thr Asn Leu Ser Asn Ser Hair Hair
130 135140
ACC TAT AAA AAT GTG GAA CCG ACA ACA ATT GGA TTT AAT AAA TCT TTA
Thr Tyr Lys Asn Val Glu Pro Thr Thr Ile Gly Phe Asn Lys Ser Leu
145 150155
ACA GAA GGT AAT ACG ATT AAT TCT GAT GCA ATG GCA CAG TTT AAA GAA
Thr Glu Gly Asn Thr Ile Asn Ser Asp Ala Met Ala Gin Phe Lys Glu
160 165 170175
CAA TTT TTA GAT AGG GAT ATT AAG TTT GAT AGT TAT CTA GAT ACG CAT
Gin Phe Leu Asp Arg Asp Ile Lys Phe Asp Ser Tyr Leu Asp Thr His
180 185190
TTA ACT GCT CAA CAA GTT TCC AGT AAA GAA AGA GTT ATT TTG AAG GTT
Leu Thr Ala Gin Gin Val Ser Ser Lys Glu Arg Val Ile Leu Lys Val
195 200205
ACG GTT CCG AGT GGG AAA GGT TCT ACT ACT CCA ACA AAA GCA GGT GTC
Thr Val Pro Ser Gly Lys Gly Ser Thr Thr Pro Thr Lys Ala Gly Val
210 215220
ATT TTA AAT AAT AGT GAA TAC AAA ATG CTC ATT GAT AAT GGG TAT ATG
Hair Leu Asn Asn Ser Glu Tyr Lys Met Leu Hair Asp Asn Gly Tyr Met
225 230235
GTC CAT GTA GAT TAAGGTATCA AAAGTGGTGA AAAAAGGGGG TGGAGTGCCT
Val His Val Asp
240
TACAAATTGA AGGGACTTTA AAAAAGAGTC TTGACTTTAA AAATGATATA AATGCTGAAG 1910
CGCATAGCTG GGGT ATG AAG AAT TAT GAA GAG TGG GCT AAA GAT TTA ACC 1960
Met Lys Asn Tyr Glu Glu Trp Ala Lys Asp Leu Thr
510
GAT TCG CAA AGG GAA GCT TTA GAT GGG TAT GCT AGG CAA GAT TAT AAA
Asp Ser Gin Arg Glu Ala Leu Asp Gly Tyr Ala Arg Gin Asp Tyr Lys
2025
GAA ATC AAT AAT TAT TTA AGA AAT CAA GGC GGA AGT GGA AAT GAA AAA
Glu Hair Asn Asn Tyr Leu Arg Asn Gin Gly Gly Ser Gly Asn Glu Lys
3540
CTA GAT GCT CAA ATA AAA AAT ATT TCT GAT GCT TTA GGG AAG AAA CCA
Leu Asp Ala Gin Hair Lys Asn Ile Ser Asp Ala Leu Gly Lys Lys Pro
50 5560
ATA CCG GAA AAT ACT ACT GTG TAT AGA TGG TGT GGC ATG CCG GAA TTT
Hair Pro Glu Asn Hair Thr Val Tyr Arg Trp Cys Gly Met Pro Glu Phe
7075
1850
2008
2056
2104
2152
RO 117111 Bl
GGT TAT CAA ATT AGT GAT CCG TTA CCT TCT TTA AAA GAT TTT GAA GAA
Gly Tyr Gin Ile Ser Asp Pro Leu Pro Ser Leu Lys Asp Phe Glu Glu
85 90
CAA TTT TTA AAT ACA ATC AAA GAA GAC AAA GGA TAT ATG AGT ACA AGC
Gin Phe Leu Asn Thr Ile Lys Glu Asp Lys Gly Tyr Met Ser Thr Ser
100 105
TTA TCG AGT GAA CGT CTT GCA GCT TTT GGA TCT AGA AAA ATT ATA TTA
2200
2248
2296
1545
1550
Leu Ser Ser Glu Arg Leu Ala Ala Phe Gly Ser Arg Lys Ile Ile Leu
110 115120
CGA TTA CAA GTT CCG AAA GGA AGT ACG GGT GCG TAT TTA AGT GCC ATT 2344
Arg Leu Gin Val Pro Lys Gly Ser Thr Gly Ala Tyr Leu Ser Ala Hair
125 130 135140
GGT GGA TTT GCA AGT GAA AAA GAG ATC CTACTT GAT AAA GAT AGT AAA 2392
Gly Gly Phe Ala Ser Glu Lys Glu Ile Leu Leu Asp Lys Asp Ser Lys
145 150155
1555
TAT CAT ACT GAT AAA GTA ACA GAG GTA ACT ATT AAA GGT GTT AAG CGA 2440
1560
Tyr His Hair Asp Lys Val Thr Glu Val Ile Hair Lys Gly Val Lys Arg
160 165 170
TAT GTA GTG GAT GCA ACA TTA TTA ACA AAT TAAGGAGATG AAAAATATGA 2490
Tyr Val Val Asp Ala Thr Leu Leu Thr Asn
175 180
AGAAAAAGTT AGCAAGTGTT GTAACGTGTA CGTTATTAGC TCCTATGTTT TTGAATGGAA
1565
2550
ATGTGAATGC TGTTTACGCA GACAGCAAAA CAAATCAAAT TTCTACAACA
CAGAAAAATC 2610
AACAGAAAGA GATGGACCGA AAAGGATTAC TTGGGTATTA TTTCAAAGGA
AAAGATTTTA 2670
GTAATCTTAC TATGTTTGCA CCGACACGTG ATAGTACTCT TATTTATGAT CAACAAACAG
1570
2730
CAAATAAACT ATTAGATAAA AAACAACAAG AATATCAGTC TATTCGTTGG ATTGGTTTGA
2790
TTCAGAGTAA AGAAACGGGA GATTTCACAT TTAACTTATC TGAGGATGAA CAGGCAATTA 2850
TAGAAATCAA TGGGAAAATT ATTTCTAATA AAGGGAAAGA AAAGCAAGTT GTCCATTTAG
2910
AAAAAGGAAA ATTAGTTCCA ATCAAAATAG AGTATCAATC AGATACAAAA TTTAATATTG
1575
1580
2970
ACAGTAAAAC ATTTAAAGAA CTTAAATTAT TTAAAATAGA TAGTCAAAAC CAACCCCAGC
3030
AAGTCCAGCA AGATGAACTG AGAAATCCTG AATTTAACAA GAAAGAATCA
CAGGAATTCT 3090
TAGCGAAACC ATCGAAAATA AATCTTTTCA CTCAAMAAAT GAAAAGGGAA
ATTGATGAAG 3150
ACACGGATAC GGATGGGGAC TCTATTCCTG ACCTTTGGGA AGAAAATGGG TATACGATTC 3210
AMAATAGAAT CGCTGTAAAG TGGGACGATT CTCTAGCAAG TAAAGGGTAT
1585
1590
ACGAAATTTG 3270
RO 117111 Bl
TTTCAAATCC ACTAGAAAGT CACACAGTTG GTGATCCTTA TACAGATTAT GAAAAGGCAG
3330
CAAGAGATCT AGATTTGTCA AATGCAAAGG AAACGTTTAA CCCATTGGTA GCTGCTTTTC 3390
CAAGTGTGAA TGTTAGTATG GAAAAGGTGA TATTATCACC AAATGAAAAT TTATCCAATA 3450
GTGTAGAGTC TCATTCATCC ACGAATTGGT CTTATACAAA TACAGAAGGT GCTTCTGTTG 3510
AAGCGGGGAT TGGACCAAAA GGTATTTCGT TCGGAGTTAG CGTAAACTAT CAACACTCTG 3570
AAACAGTTGC ACAAGAATGG GGAACATCTA CAGGAAATAC TTCGCAATTC
AATACGGCTT 3630
CAGCGGGATA TTTAAATGCA AATGTTCGAT ATAACAATGT AGGAACTGGT GCCATCTACG 3690
ATGTAAAACC TACAACAAGT TTTGTATTAA ATAACGATAC TATCGCAACT ATTACGGCGA 3750
AATCTAATTC TACAGCCTTA AATATATCTC CTGGAGAAAG TTACCCGAAA AAAGGACAAA 3810
ATGGAATCGC AATAACATCA ATGGATGATT TTAATTCCCA TCCGATTACA TTAAATAAAA 3870
AACAAGTAGA TAATCTGCTA AATAATAAAC CTATGATGTT GGAAACAAAC CAAACAGATG 3930
GTGTTTATAA GATAAAAGAT ACACATGGAA ATATAGTAAC TGGCGGAGAA
TGGAATGGTG 3990
TCATACAACA AATCAAGGCT AAAACAGCGT CTATTATTGT GGATGATGGG GAACGTGTAG 4050
CAGAAAAACG TGTAGCGGCA AAAGATTATG AAAATCCAGA AGATAAAACA
CCGTCTTTAA 4110
CTTTAAAAGA TGCCCTGAAG CTTTCATATC CAGATGAAAT AAAAGAAATA GAGGGATTAT 4170
TATATTATAA AAACAAACCG ATATACGAAT CGAGCGTTAT GACTTACTTA GATGAAAATA 4230
CAGCAAAAGA AGTGACCAAA CAATTAAATG ATACCACTGG GAAATTTAAA
GATGTAAGTC 4290
ATTTATATGA TGTAAAACTG ACTCCAAAAA TGAATGTTAC AATCAAATTG TCTATACTTT 4350
ATGATAATGC TGAGTCTAAT GATAACTCAA TTGGTAAATG GACAAACACA AATATTGTTT 4410
CAGGTGGAAA TAACGGAAAA AAACAATATT CTTCTAATAA TCCGGATGCT AATTTGACAT 4470
TAAATACAGA TGCTCAAGAA AAATTAAATA AAAATCGTGA CTATTATATA ACTTTATATA 9530
TGAAGTCAGA AAAAAACACA CAATGTGAGA TTACTATAGA TGGGGAGATT
TATCCGATCA 4590
CTACAAAAAC AGTGAATGTG AATAAAGACA ATTACAAAAG ATTAGATATT ATAGCTCATA
4650
1640
RO 117111 Bl
ATATAAAAAG TAATCCAATT TCTTCACTTC ATATTAAAAC GAATGATGAA ATTAACTTTAT
4710
TTTGGGATGA TATTTCTATA ACAGATGTAG CATCAATAAA ACCGGAAAAT TTAACAGATT 4770
CAGAAATTAA ACAGATTTAT AGTAGGTATG GTATTAAGTT AGAAGATGGA ATCCTTATTG 4830 ataaaaaagg tgggattcat tatggtgaat ttattaatga agctagtttt aatattgaac
4890
CATTGCCAAA TTATGTGACC AAATATGAAG TTACTTATAG TAGTGAGTTA GGACCAAACG 9950
TGAGTGACAC ACTTGAAAGT GATAAAATTT ACAAGGATGG GACAATTAAA TTTGATTTTA 5010
CCAAATATAG TAAAAATGAA CAAGGATTAT TTTATGACAG TGGATTAAAT TGGGACTTTA 5070
AAATTAATGC TATTACTTAT GATGGTAAAG AGATGAATGT TTTTCATAGA TATAATAAAT 5130
TGGTGCTAAA GATAGTGTAA AAGTTAATAT ACTGTAGGAT 5190 TCTATGAAGC
TGTAATAAAA GTAATGG AAT TGATATCGTA CTTTGGAGTG GGGGATACTT TGTAAATAGT 5250
TCTATCAGAA ACATTAGACT AAGAAAAGTT ACTACCCCCA CTTGAAAATG AAGATTCAAC 5310
TGATTACAAA CAACCTGTTA AATATTATAA GGTTTTAACA AAATATTAAA CTCTTTATGT 5370
TAATACTGTA ATATAAAGAG TTTAATTGTA TTCAAATGAA GCTTTCCCAC AAAATTAGAC 5430
TGATTATCTA ATGAAATAAT CAGTCTAATT TTGTAGAACA GGTCTGGTAT TATTGTACGT 5490
GGTCACTAAA AGATATCTAA TATTATTGGG CAAGGCGTTC CATGATTGAA TCCTCGAATG 5550
TCTTGCCCTT TTCATTTATT TAAGAAGGAT TGTGGAGAAA nATGGTTTA GATAATGAAG 5610
AAAGACTTCA CTTCTAATH TTGATGTTAA ATAAATCAAA ATTTGGCGAT TCACATTGTT
5670
TAATCCACTG ATAAAACATA CTGGAGTGTT CTTAAAAAAT CAGUI11111 CTTTATAAAA 5730
TTTTGCTTAG CGTACGAAAT TCGTGTTTTG TTGGTGGGAC CCCATGCCCA TCAACTTAAG 5790
AGTAAATTAG TAATGAACTT TCGTTCATCT GGATTAAAAT AACCTCAAAT TAGGACATGT 5850
TTTTAAAAAT AAGCAGACCA AATAAGCCTA GAATAGGTAT CATTTTTAAA AATTATGCTG 5910
Five 11IG TTTTCCAAAT CCATTATACT CATAAGCAAC ACCCATAATG TCAAAGACTG 5970
TTTTTGTCTC ATATCGATAA GCTTGATATC GAATTCCTGC AGCCCGGGGG ATCCACTAGT
6030
1645
1650
1655
1660
1665
1670
1675
1680
RO 117111 Bl
TCTAGAGCGG CCGCCACCGC GGTGGAGCTC CAGCTTTTGT TCCCTTTAGT GAGGGTTAAG
6090
TTCGAGCTTG TCGTGG
6106 (2) Information for SEQ ID NO: 2:
(i) sequence characteristics:
(a) length: 243 amino acids (b) type: amino acid (d) topology: linear (ii) molecule type: protein (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 2:
Met Lys Arg Met Glu Gly Lys Leu Phe Met Val Ser Lys Lys Leu Gin
1015
Val Val Thr Lys Thr Val Leu Leu Ser Thr Val Phe Ser lle Ser Leu
2530
Leu Asn Asn Glu Val lle Lys Ala Glu Gin Leu Asn lle Asn Ser Gin
4045
Ser Lys Tyr Thr Asn Leu Gin Asn Leu Lys lle Thr Asp Lys Val Glu
5560
Asp Phe Lys Glu Asp Lys Glu Lys Ala Lys Glu Trp Gly Lys Glu Lys
70 7580
Glu Lys Glu Trp Lys Leu Thr Ala Thr Glu Lys Gly Lys Met Asn Asn
9095
Phe Leu Asp Asn Lys Asn Asp lle Xaa Thr Asn Tyr Lys Glu lle Thr
100 105110
Phe Ser Met Ala Gly Ser Phe Glu Asp Glu lle Lys Asp Leu Lys Glu
115 120125 le Asp Lys Met Phe Asp Lys Thr Asn Leu Ser Asn Ser le Le Thr
130 135140
Tyr Lys Asn Val Glu Pro Thr Thr lle Gly Phe Asn Lys Ser Leu Thr
145 150 155160
Glu Gly Asn Thr lle Asn Ser Asp Ala Met Ala Gin Phe Lys Glu Gin
165 170175
Phe Leu Asp Arg Asp lle Lys Phe Asp Ser Tyr Leu Asp Thr His Leu
180 185190
Thr Ala Gin Gin Val Ser Ser Lys Glu Arg Val lle Leu Lys Val Thr
195 200205
Val Pro Ser Gly Lys Gly Ser Thr Thr Pro Thr Lys Ala G1y Va1 lle
210 215220
Leu Asn Asn Ser Glu Tyr Lys Met Leu lle Asp Asn Gly Tyr Met Val
225 230 235240
His Val
RO 117111 Bl (2) Information for SEQ ID NO: 3:
(i) sequence characteristics:
(a) length: 182 amino acids (b) type: amino acid (D) topology: linear (ii) molecule type: protein (xi) SEQUENCE DESCRIPTION: SEQ ID NO; 3:
Met Lys Asn Tyr Glu Glu Trp Ala Lys Asp Leu Thr Asp Ser Gin Arg
5 1015
Glu Ala Leu Asp Gly Tyr Ala Arg Gin Asp Tyr Lys Glu lle Asn Asn
2530
Tyr Leu Arg Asn Gin Gly Gly Ser Gly Asn Glu Lys Leu Asp Ala Gin
4045 le Lys Asn lle Ser Asp Ala Leu Gly Lys Lys Pro le Pro Glu Asn
5560 lle Thr Val Tyr Arg Trp Cys Gly Met Pro Glu Phe Gly Tyr Gin lle
70 7580
Ser Asp Pro Leu Pro Ser Leu Lys Asp Phe Glu Glu Gin Phe Leu Asn
9095
Thr lle Lys Glu Asp Lys Gly Tyr Met Ser Thr Ser Leu Ser Ser Glu 100 105110
Arg Leu Ala Ala Phe Gly Ser Arg Lys leu Arg Leu Gin Val
115 120125
Pro Lys Gly Ser Thr Gly Ala Tyr Leu Ser Ala lle Gly Gly Phe Ala
130 135140
Ser Gys Lys Glu Leu Leu Leu Asp Lys Asp Ser Lys Tyr His lle Asp 145 150 155160
Lys Val Thr Glu Val lle lle Lys Gly Val Lys Arg Tyr Val Val Asp
165 170175
Ala Thr Leu Leu Thr Asn
180 (2) Information for SEQ ID NO: 4:
(i) sequence characteristics:
(a) length: 2655 base pairs (b) type: nucleic acid (c) winding: simple (d) topology: linear (ii) molecule type: DNA (genomic) (iii) hypothetical: no
1730
1735
1740
1745
1750
1755
1760
1765 (iii) anti-sense: no
1770
RO 117111 Bl (vi) original source:
(a) organism: Bacillus cereus (b) variety: AB78 (c) isolated individually: NRRL B-21O58 (ix) characteristics:
(a) name / key: CDS (b) location: 1 ... 2652 (c) identification method: experimental (d) other information / product: = "VIP-1 protein, 10O kDa" / evidence = experimental ( xi) DESCRIPTION OF THE SEQUENCE: SEQ ID NO: 4:
ATG AAA AAT ATG AAG AAA AAG TTA GCA AGT GTT GTA ACG TGT ACG TTA 48
Met Lys Asn Met Lys Lys Lys Leu Ala Ser Val Val Thr Cys Thr Leu
5 1015
TTA GCT CCT ATG TTT TTG AAT GGA AAT GTG AAT GCT GTT TAC GCA GAC 96
Leu Ala Pro Met Phe Leu Asn Gly Asn Val Asn Ala Val Tyr Ala Asp
2530
AGC AAA ACA AAT CAA ATT TCT ACA ACA CAG AAA AAT CAA CAG AAA GAG 144
Ser Lys Thr Asn Gin lle Ser Thr Thr Gin Lys Asn Gin Gin Lys Glu
4045
ATG GAC CGA AAA GGA TTA CTT GGG TAT TAT TTC AAA GGA AAA GAT TTT 192
Met Asp Arg Lys Gly Leu Leu Gly Tyr Tyr Phe Lys Gly Lys Asp Phe
5560
AGT AAT CTT ACT ATG TTT GCA CCG ACA CGT GAT AGT ACT CH ATT TAT 240
Ser Asn Leu Thr Met Phe Ala Pro Thr Arg Asp Ser Thr Leu lle Tyr
70 7580
GAT CAA CAA ACA GCA AAT AAA CTA TTA GAT AAA AAA CAA CAA GAA TAT 288
Asp Gin Gin Thr Ala Asn Lys Leu Leu Asp Lys Lys Gin Gin Glu Tyr
9095
CAG TCT ATT CGT TGG ATT GGT TTG ATT CAG AGT AAA GAA ACG GGA GAT 336
Gin Ser lle Arg Trp lle Gly Leu lle Gin Ser Lys Glu Thr Gly Asp
100 105110
TTC ACA TTT AAC TTA TCT GAG GAT GAA CAG GCA ATT ATA GAA ATC AAT 384
Phe Thr Phe Asn Leu Ser Glu Asp Glu Gin Allah li Glu li Asn
115 120125
GGG AAA ATT ATT TCT AAT AAA GGG AAA GAA AAG CAA GTT GTC CAT TTA 432
Gly Lys Him Ser Asn Lys Gly Lys Glu Lys Gin Val Val His Leu
130 135140
GAA AAA GGA AAA TTA GTT CCA ATC AAA ATA GAG TAT CAA TCA GAT ACA 480
Glu Lys Gly Lys Leu Val Pro lle Lys lle Glu Tyr Gin Ser Asp Thr
145 150 155160
AAA TTT AAT ATT GAC AGT AAA ACA TTT AAA GAA CTT AAA TTA TTT AAA 528
Lys Phe Asn lle Asp Ser Lys Thr Phe Lys Glu Leu Lys Leu Phe Lys
165 170175
RO 117111 Bl
ΑΤΑ GAT AGT CAA AAC CAA CCC CAG CAA GTC CAG CAA GAT GAA CTG AGA 576 lle Asp Ser Gin Asn Gin Pro Gin Gin Val Gin Gin Asp Glu Leu Arg 180 185190
AAT CCT GAA TTT AAC AAG AAA GAA TCA CAG GAA TTC TTA GCG AAA CCA
Asn Pro Glu Phe Asn Lys Lys Glu Ser Gin Glu Phe Leu Ala Lys Pro
195 200205
TCG AAA ATA AAT CTT TTC ACT CAA MAA ATG AAA AGG GAA ATT GAT GAA
Ser Lys lle Asn Leu Phe Thr Gin Xaa Met Lys Arg Glu lle Asp Glu
210 215220
GAC ACG GAT ACG GAT GGG GAC TCT ATT CCT GAC CTT TGG GAA GAA AAT
Asp Thr Asp Thr Asp Gly Asp Ser lle Pro Asp Leu Trp Glu Glu Asn
225 230 235240
GGG TAT ACG ATT CAM AAT AGA ATC GCT GTA AAG TGG GAC GAT TCT CTA Gly Tyr Thr lle Xaa Asn Arg lle Ala Val Lys Trp Asp Asp Ser Leu
245 250255
GCA AGT AAA GGG TAT ACG AAA TTT GTT TCA AAT CCA CTA GAA AGT CAC
Ala Ser Lys Gly Tyr Thr Lys Phe Val Ser Asn Pro Leu Glu Ser His
260 265270
ACA GTT GGT GAT CCT TAT ACA GAT TAT GAA AAG GCA GCA AGA GAT CTA
Thr Val Gly Asp Pro Tyr Thr Asp Tyr Glu Lys Ala Ala Arg Asp Leu
275 280285
GAT TTG TCA AAT GCA AAG GAA ACG TTT AAC CCA TTG GTA GCT GCT TTT
Asp Leu Ser Asn Ala Lys Glu Thr Phe Asn Pro Leu Val Ala Ala Phe
290 295300
CCA AGT GTG AAT GTT AGT ATG GAA AAG GTG ATA TTA TCA CCA AAT GAA
Pro Ser Val Asn Val Ser Met Glu Lys Val lle Leu Ser Pro Asn Glu
305 310 315320
AAT TTA TCC AAT AGT GTA GAG TCT CAT TCA TCC ACG AAT TGG TCT TAT Asn Leu Ser Asn Ser Val Glu Ser His Ser Ser Thr Asn Trp Ser Tyr 325 330335
ACA AAT ACA GAA GGT GCT TCT GTT GAA GCG GGG ATT GGA CCA AAA GGT
Thr Asn Thr Glu Gly Ala Ser Val Glu Ala Gly lle Gly Pro Lys Gly
340 345350
ATT TCG TTC GGA GTT AGC GTA AAC TAT CAA CAC TCT GAA ACA GTT GCA lle Ser Phe Gly Val Ser Val Asn Tyr Gin His Ser Glu Thr Val Ala
355 360365
CAA GAA TGG GGA ACA TCT ACA GGA AAT ACT TCG CAA TTC AAT ACG GCT
Gin Glu Trp Gly Thr Ser Thr Gly Asn Thr Ser Gin Phe Asn Thr Ala
370 375 380
TCA GCG GGA TAT TTA AAT GCA AAT GTT CGA TAT AAC AAT GTA GGA ACT
Ser Ala Gly Tyr Leu Asn Ala Asn Val Arg Tyr Asn Asn Val Gly Thr
385 390 395 400
GGT GCC ATC TAC GAT GTA AAA CCT ACA ACA AGT TTT GTA TTA AAT AAC
Gly Ala lle Tyr Asp Val Lys Pro Thr Thr Ser Phe Val Leu Asn Asn
405 410 415
1820
624
672
720
768
816
864
912
960
1008
1056
1104
1152
1200
1825
1830
1835
1840
1845
1850
1855
1860
1248
RO 117111 Bl
GAT ACT ATC GCA ACT ATT ACG GCG AAA TCT AAT TCT ACA GCC TTA AAT Asp Thr Ile Ala Thr Ile Thr Ala Lys Ser Asn Ser Thr Ala Leu Asn
420 425430
ATA TCT CCT GGA GAA AGT TAC CCG AAA AAA GGA CAA AAT GGA ATC GCA Ile Ser Pro Gly Glu Ser Tyr Pro Lys Lys Gly Gin Asn Gly Ile Ala
435 440445
ATA ACA TCA ATG GAT GAT TTT AAT TCC CAT CCG ATT ACA TTA AAT AAA Ile Thr Ser Met Asp Asp Phe Asn Ser His Pro Ile Thr Leu Asn Lys
450 455460
AAA CAA GTA GAT AAT CTG CTA AAT AAT AAA CCT ATG ATG TTG GAA ACA Lys Gin Val Asp Asn Leu Leu Asn Asn Lys Pro Met Met Leu Glu Thr 465 470 475480
AAC CAA ACA GAT GGT GTT TAT AAG ATA AAA GAT ACA CAT GGA AAT ATA Asn Gin Thr Asp Gly Val Tyr Lys Ile Lys Asp Thr His Gly Asn Ile
485 430495
GTA ACT GGC GGA GAA TGG AAT GGT GTC ATA CAA CAA ATC AAG GCT AAA Val Thr Gly Gly Glu Trp Asn Gly Val ile Gin Gin Ile Lys Ala Lys
500 505510
ACA GCG TCT ATT ATT GTG GAT GAT GGG GAA CGT GTA GCA GAA AAA CGT Thr Ala Ser Ile Ile Val Asp Asp Gly Glu Arg Val Ala Glu Lys Arg
515 520525
GTA GCG GCA AAA GAT TAT GAA AAT CCA GAA GAT AAA ACA CCG TCT TTA Val Ala Ala Lys Asp Tyr Glu Asn Pro Glu Asp Lys Thr Pro Ser Leu
530 535540
ACT TTA AAA GAT GCC CTG AAG CTT TCA TAT CCA GAT GAA ATA AAA GAA Thr Leu Lys Asp Ala Leu Lys Leu Ser Tyr Pro Asp Glu Ile Lys Glu 545 550 555560
ATA GAG GGA TTA TTA TAT TAT AAA AAC ZXAA CCG ATA TAC GAA TCG AGC Ile Glu Gly Leu Leu Tyr Tyr Lys Asn Lys Pro Ile Tyr Glu Ser Ser
565 570575
GTT ATG ACT TAC TTA GAT GAA AAT ACA GCA AAA GAA GTG ACC AAA CAA
Val Met Thr Tyr Leu Asp Glu Asn Thr Ala Lys Glu Val Thr Lys Gin
580 585590
TTA AAT GAT ACC ACT GGG AAA TTT AAA GAT GTA AGT CAT TTA TAT GAT Leu Asn Asp Thr Thr Gly Lys Phe Lys Asp Val Ser His Leu Tyr Asp
595 600605
GTA AAA CTG ACT CCA AAA ATG AAT GTT ACA ATC AAA TTG TCT ATA CTT Val Lys Leu Thr Pro Lys Met Asn Val Thr Ile Lys Leu Ser Ile Leu
610 615620
TAT GAT AAT GCT GAG TCT AAT GAT AAC TCA ATT GGT AAA TGG ACA AAC Tyr Asp Asn Ala Glu Ser Asn Asp Asn Ser Ile Gly Lys Trp Thr Asn 625 630 635640
ACA AAT ATT GTT TCA GGT GGA AAT AAC GGA AAA AAA CAA TAT TCT TCT Thr Asn Ile Val Ser Gly Gly Asn Asn Gly Lys Lys Gys Tyr Ser Ser
645 650655
1296
1344
1392
1440
1488
1536
1584
1632
1680
1728
1776
1824
1-872
1920
1968
RO 117111 Bl
2016
1910
2064
AAT AAT CCG GAT GCT AAT TTG ACA TTA AAT ACA GAT GCT CAA GAA AAA
Asn Asn Pro Asp Ala Asn Leu Thr Leu Asn Thr Asp Ala Gin Glu Lys
660 665 670
TTA AAT AAA AAT CGT GAC TAT TAT ATA AGT TTA TAT ATG AAG TCA GAA
Leu Asn Lys Asn Arg Asp Tyr Tyr Ile Ser Leu Tyr Met Lys Ser Glu
675 680685
AAA AAC ACA CAA TGT GAG ATT ACT ATA GAT GGG GAG ATT TAT CCG ATC Lys Asn Thr Gin Cys Glu Ile Thr Ile Asp Gly Glu Ile Tyr Pro Ile
690 695700
ACT ACA AAA ACA GTG AAT GTG AAT AAA GAC AAT TAC AAA AGA TTA GAT Thr Thr Lys Thr Val Asn Val Asn Lys Asp Asn Tyr Lys Arg Leu Asp
705 710 715720
ACT ATA GCT CAT AAT ATA AAA AGT AAT CCA ATT TCT TCA CTT CAT ATT Ile Ile Ala His Asn Ile Lys Ser Asn Pro Ile Ser Ser Leu His Ile
725 730735
AAA ACG AAT GAT GAA ATA ACT TTA ΤΓΤ TGG GAT GAT ATT TCT ATA ACA Lys Thr Asn Asp Glu Ile Thr Leu Phe Trp Asp Asp Ile Ser Ile Thr
740 745750
GAT GTA GCA TCA ATA AAA CCG GAA AAT TTA ACA GAT TCA GAA ATT AAA Asp Val Ala Ser Ile Lys Pro Glu Asn Leu Thr Asp Ser Glu Ile Lys
755 760765
CAG ATT TAT AGT AGG TAT GGT ATT AAG TTA GAA GAT GGA ATC CTT ATT Gin Ile Tyr Ser Arg Tyr Gly Ile Lys Leu Glu Asp Gly Ile Leu Ile
770 775780
GAT AAA AAA GGT GGG ATT CAT TAT GGT GAA TTT ATT AAT GAA GCT AGT Asp Lys Lys Gly Gly Ile His Tyr Gly Glu Phe Ile Asn Glu Ala Ser
785 790 795800
TTT AAT ATT GAA CCA TTG CCA AAT TAT GTG ACC AAA TAT GAA GTT ACT Phe Asn Ile Glu Pro Leu Pro Asn Tyr Val Thr Lys Tyr Glu Val Thr
805 810815
TAT AGT AGT GAG TTA GGA CCA AAC GTG AGT GAC ACA CTT GAA AGT GAT Tyr Ser Ser Glu Leu Gly Pro Asn Val Ser Asp Thr Leu Glu Ser Asp
820 825830
AAA ATT TAC AAG GAT GGG ACA ATT AAA TTT GAT TTT ACC AAA TAT AGT Lys Ile Tyr Lys Asp Gly Thr Ile Lys Phe Asp Phe Thr Lys Tyr Ser
835 840845
AAA AAT GAA CAA GGA TTA TTT TAT GAC AGT GGA TTA AAT TGG GAC TTT Lys Asn Glu Gin Gly Leu Phe Tyr Asp Ser Gly Leu Asn Trp Asp Phe
850 855 860
AAA ATT AAT GCT ATT ACT TAT GAT GGT AAA GAG ATG AAT GTT TTT CAT
Lys Hair Asn Ala Hair Thr Tyr Asp Gly Lys Glu Met Asn Val Phe His
865 870 875 880
AGA TAT AAT AAA TAG
Arg Tyr Asn Lys
2112
2160
2208
2256
2304
2352
2400
2448
2496
2544
2592
2640
1915
1920
1925
1930
1935
1940
1945
1950
2655
RO 117111 Bl (2) Information for SEQ ID NO: 5:
(i) sequence characteristics:
(a) length: 884 amino acids (b) type: amino acid (d) topology: linear (ii) molecule type: protein (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 5:
Met Lys Asn Met Lys Lys Lys Leu Ala Ser Val Val Thr Cys Thr Leu 15 1015
Leu Ala Pro Met Phe Leu Asn Gly Asn Val Asn Ala Val Tyr Ala Asp 20 2530
Ser Lys Thr Asn Gin lle Ser Thr Thr Gin Lys Asn Gin Gin Lys Glu
4045
Met Asp Arg Lys Gly Leu Leu Gly Tyr Tyr Phe Lys Gly Lys Asp Phe 50 5560
Ser Asn Leu Thr Met Phe Ala Pro Thr Arg Asp Ser Thr Leu lle Tyr 65 70 7580
Asp Gin Gin Thr Ala Asn Lys Leu Leu Asp Lys Lys Gin Gin Glu Tyr 85 9095
Gin Ser lle Arg Trp lle Gly Leu lle Gin Ser Lys Glu Thr Gly Asp 100 105110
Phe Thr Phe Asn Leu Ser Glu Asp Glu Gin Ala li Glu lle Asn 115 120125
Gly Lys lle lle Ser Asn Lys Gly Lys Glu Lys Gin Val Val His Leu 130 135140
Glu Lys Gly Lys Leu Val Pro lle Lys lle Glu Tyr Gin Ser Asp Thr 145 150 155160
Lys Phe Asn lle Asp Ser Lys Thr Phe Lys Glu Leu Lys Leu Phe Lys 165 170175 lle Asp Ser Gin Asn Gin Pro Gin Gin Val Gin Gin Asp Glu Leu Arg 180 185190
Asn Pro Glu Phe Asn Lys Lys Glu Ser Gin Glu Phe Leu Ala Lys Pro 195 200205
Ser Lys lle Asn Leu Phe Thr Gin Xaa Met Lys Arg Glu lle Asp Glu 210 215220
Asp Thr Asp Thr Asp Gly Asp Ser lle Pro Asp Leu Trp Glu Glu Asn 225 230 235240
Gly Tyr Thr lle Xaa Asn Argle Ala Val Lys Trp Asp Asp Ser Leu 245 250255
A1 a Ser Lys Gly Tyr Thr Lys Phe Val Ser Asn Pro Leu Glu Ser His 260 265270
Thr Val Gly Asp Pro Tyr Thr Asp Tyr Glu Lys Ala Ala Arg Asp Leu
275 280285
RO 117111 Bl
Asp Leu Ser Asn Ala Lys Glu Thr Phe Asn Pro Leu Val Ala Ala Phe 290 295300
Pro Ser Val Asn Val SerMet Glu Lys Val Ile Leu Ser Pro Asn Glu 305 310 315320
Asn Leu Ser Asn Ser Val Glu Ser His Ser Ser Thr Asn Trp Ser Tyr 325 330335
Thr Asn Thr Glu Gly Ala Ser Val Glu Ala Gly Hair Gly Pro Lys Gly
340 345350
Ile Ser Phe Gly Val Ser Val Asn Tyr Gin His Ser Glu Thr Val Ala 355 360365
Gin Glu Trp Gly Thr Ser Thr Gly Asn Thr Ser Gin Phe Asn Thr Ala 370 375380
Ser Ala Gly Tyr Leu Asn Ala Asn Val Arg Tyr Asn Asn Val Gly Thr 385 390 395400
Gly Ala Ile Tyr Asp Val Lys Pro Thr Thr Ser Phe Val Leu Asn Asn
405 410415
Asp Thr Ile Ala Thr Ile Thr Ala Lys Ser Asn Ser Thr Ala Leu Asn 420 425430
Hair Ser Pro Gly Glu Ser Tyr Pro Lys Lys Gly Gin Asn Gly Ile Ala 435 440445
Hair Thr Ser Met Asp Asp Phe Asn Ser His Pro Hair Thr Leu Asn Lys 450 455460
Lys Gin Val Asp Asn Leu Leu Asn Asn Lys Pro Met Met Leu Glu Thr 465 970 975480
Asn Gin Thr Asp Gly Val Tyr Lys Hair Lys Asp Thr His Gly Asn Hair
485 490495
Val Thr Gly Gly Glu Trp Asn Gly Val Hair Gin Gin Hair Lys Ala Lys
500 505510
Thr Ala Ser Ile Ile Val Asp Asp Gly Glu Arg Val Ala Glu Lys Arg 515 520525
Val Ala Ala Lys Asp Tyr Glu Asn Pro Glu Asp Lys Thr Pro Ser Leu 530 535540
Thr Leu Lys Asp Ala Leu Lys Leu Ser Tyr Pro Asp Glu Ile Lys Glu 545 550 555560
Hair Glu Gly Leu Leu Tyr Tyr Lys Asn Lys Pro Hair Tyr Glu Ser Ser
565 570575
Val Met Thr Tyr Leu Asp Glu Asn Thr Ala Lys Glu Val Thr Lys Gin 580 585590
Leu Asn Asp Thr Thr Gly Lys Phe Lys Asp Val Ser His Leu Tyr Asp 595 600605
Val Lys Leu Thr Pro Lys Met Asn Val Thr Ile Lys Leu Ser Ile Leu 610 615620
Tyr Asp Asn Ala Glu Ser Asn Asp Asn Ser Ile Gly Lys Trp Thr Asn 625 630 635640
Thr Asn Ile Val Ser Gly Gly Asn Asn Gly Lys Lys Gin Tyr Ser Ser
645 650655
2000
2005
2010
2015
2020
2025
2030
2035
2040
RO 117111 Bl
Asn Asn Pro Asp Ala Asn Leu Thr Leu Asn Thr Asp Ala Gin Glu Lys
660 665 670
Leu Asn Lys Asn Arg Asp Tyr Tyr Ile Ser Leu Tyr Met Lys Ser Glu
675 680 685
Lys Asn Thr Gin Cys Glu Hair Thr Hair Asp Gly Glu Hair Tyr Pro Hair
690 695700
Thr Thr Lys Thr Val Asn Val Asn Lys Asp Asn Tyr Lys Arg Leu Asp 705 710 715720
Hair Hair Ala His Asn Hair Lys Ser Asn Pro Hair Ser Ser Leu His Hair
725 730735
Lys Thr Asn Asp Glu Ile Thr Leu Phe Trp Asp Asp Ile Ser Ile Thr 740 745750
Asp Val Ala Ser Ile Lys Pro Glu Asn Leu Thr Asp Ser Glu Ile Lys
755 760765
Gin Hair Tyr Ser Arg Tyr Gly Hair Lys Leu Glu Asp Gly Hair Leu Hair
770 775780
Asp Lys Lys Gly Gly Ile His Tyr Gly Glu Phe Ile Asn Glu Ala Ser
785 790 795800
Phe Asn Ile Glu Pro Leu Pro Asn Tyr Val Thr Lys Tyr Glu Val Thr
805 810815
Tyr Ser Ser Glu Leu Gly Pro Asn Val Ser Asp Thr Leu Glu Ser Asp 820 825830
Lys Ile Tyr Lys Asp Gly Thr Ile Lys Phe Asp Phe Thr Lys Tyr Ser 835 840845
Lys Asn Glu Gin Gly Leu Phe Tyr Asp Ser Gly Leu Asn Trp Asp Phe 850 855860
Lys Ile Asn Ala Ile Thr Tyr Asp Gly Lys Glu Met Asn Val Phe His 865 870 875880
ArgTyrAsn Lys (2) Information for SEQ ID NO: 6:
(i) sequence characteristics:
(a) length: 2004 base pairs (b) type: nucleic acid (c) winding: simple (d) topology: linear (ii) molecule type: DNA (genomic) (iii) hypothetical: not (iii) anti-sense : not (vi) original source:
(a) organism: Bacillus cereus (b) variety: AB78 (c) individual isolate: NRRL B-21058
RO 117111 Bl
2090 (ix) characteristics:
(a) name / key: CDS (b) location: 1 ... 2001 (c) identification method: experimental (d) other information: / product = .80 kda VIP-1 protein / / evidence = experimental
2095 (xi) DESCRIPTION OF THE SEQUENCE: SEQ ID NO: 6:
ATG AAA AGG GAA ATT GAT GAA GAC ACG GAT ACG GAT GGG GAC TCT ATT Met Lys Arg Glu lle Asp Glu Asp Thr Asp Thr Asp Gly Asp Ser lle
5 1015
CCT GAC CTT TGG GAA GAA AAT GGG TAT ACG ATT CAM AAT AGA ATC GCT
Pro Asp Leu Trp Glu Glu Asn Gly Tyr Thr lle Xaa Asn Arg lle Ala
2530
GTA AAG TGG GAC GAT TCT CTA GCA AGT AAA GGG TAT ACG AAA TTT GTT
Val Lys Trp Asp Asp Ser Leu Ala Ser Lys Gly Tyr Thr Lys Phe Val
4045
TCA AAT CCA CTA GAA AGT CAC ACA GTT GGT GAT CCT TAT ACA GAT TAT
Ser Asn Pro Leu Glu Ser His Thr Val Gly Asp Pro Tyr Thr Asp Tyr
5560
GAA AAG GCA GCA AGA GAT CTA GAT TTG TCA AAT GCA AAG GAA ACG TTT
Glu Lys Ala Ala Arg Asp Leu Asp Leu Ser Asn Ala Lys Glu Thr Phe
70 7580
AAC CCA TTG GTA GCT GCT TTT CCA AGT GTG AAT GTT AGT ATG GAA AAG Asn Pro Leu Val Ala Ala Phe Pro Ser Val Asn Val Ser Met Glu Lys
9095
GTG ΑΤΑ TTA TCA CCA AAT GAA AAT TTA TCC AAT AGT GTA GAG TCT CAT Val leu Le Pro Ser Asn Glu Asn Leu Ser Asn Ser Val Glu Ser His
100 105110
TCA TCC ACG AAT TGG TCT TAT ACA AAT ACA GAA GGT GCT TCT GTT GAA
Ser Ser Thr Asn Trp Ser Tyr Thr Asn Thr Glu Gly Ala Ser Val Glu
115 120125
GCG GGG ACT GGA CCA AAA GGT ATT TCG TTC GGA GTT AGC GTA AAC TAT
Ala Gly le Gly Pro Lys Gly le Ser Phe Gly Val Ser Val Asn Tyr
130 135140
CAA GAC TCT GAA ACA GTT GCA CAA GAA TGG GGA ACA TCT ACA GGA AAT
Gin His Ser Glu Thr Val Ala Gin Glu Trp Gly Thr Ser Thr Gly Asn
145 150 155160
ACT TCG CAA TTC AAT ACG GCT TCA GCG GGA TAT TTA AAT GCA AAT GTT Thr Ser Gin Phe Asn Thr Ala Ser Ala Gly Tyr Leu Asn Ala Asn Val
165 170 175
CGA TAT AAC AAT GTA GGA ACT GGT GCC ATC TAC GAT GTA AAA CCT ACA
Arg Tyr Asn Asn Val Gly Thr Gly Ala lle Tyr Asp Val Lys Pro Thr
180 185 190
ACA AGT TTT GTA TTA AAT AAC GAT ACT ATC GCA ACT ATT ACG GCG AAA
Thr Ser Phe Val Leu Asn Asn Asp Thr lle Ala Thr lle Thr Ala Lys
195 200 205
144
192
240
288
336
384
432
480
528
576
2100
2105
2110
2115
2120
2125
2130
624
2135
RO 117111 Bl
TCT AAT TCT ACA GCC TTA AAT ATA TCT CCT GGA GAA AGT TAC CCG AAA
Ser Asn Ser Thr A1 a Leu Asn lle Ser Pro Gly Glu Ser Tyr Pro Lys
210 215220
AAA GGA CAA AAT GGA ATC GCA ATA ACA TCA ATG GAT GAT TTT AAT TCC
Lys Gly Gin Asn Gly li Ala lle Thr Ser Met Asp Asp Phe Asn Ser
225 230 235240
CAT CCG ATT ACA TTA AAT AAA AAA CAA GTA GAT AAT CTG CTA AAT AAT His Pro lle Thr Leu Asn Lys Lys Gin Val Asp Asn Leu Leu Asn Asn
245 250255
AAA CCT ATG ATG TTG GAA ACA AAC CAA ACA GAT GGT GTT TAT AAG ATA Lys Pro Met Met Leu Glu Thr Asn Gin Thr Asp Gly Val Tyr Lys lle
260 265270
AAA GAT ACA CAT GGA AAT ATA GTA ACT GGC GGA GAA TGG AAT GGT GTC Lys Asp Thr His Gly Asn lle Val Thr Gly Gly Glu Trp Asn Gly Val
275 280285
ATA CAA CAA ATC AAG GCT AAA ACA GCG TCT ATT ATT GTG GAT GAT GGG le Gin Gin le Lys A1a Lys Thr Ala Serile le Val Asp Asp Gly
290 295300
GAA CGT GTA GCA GAA AAA CGT GTA GCG GCA AAA GATTAT GAA AAT CCA Glu Arg Val Ala Glu Lys Arg Val Ala Ala Lys Asp Tyr Glu Asn Pro
305 310 315320
GAA GAT AAA ACA CCG TCT TTA ACT TTA AAA GAT G ~ C CTG AAG CTT TCA
Glu Asp Lys Thr Pro Ser Leu Thr Leu Lys Asp Ala Leu Lys Leu Ser
325 330335
TAC CCA GAT GAA ATA AAA GAA ATA GAG GGA TTA TTA TAT TAT AAA AAC
Tyr Pro Asp Glu le Lys Glu lle Glu Gly Leu Leu Tyr Tyr Lys Asn
340 345350
AAA CCG ATA TAC GAA TCG AGC GTT ATG ACT TAC TTA GAT GAA AAT ACA
Lys Pro lle Tyr Glu Ser Ser Val Met Thr Tyr Leu Asp Glu Asn Thr
355 360365
GCA AAA GAA GTG ACC AAA CAA TTA AAT GAT ACC ACT GGG AAA TTT AAA
Ala Lys Glu Val Thr Lys Gin Leu Asn Asp Thr Thr Gly Lys Phe Lys
370 375380
GAT GTA AGT CAT TTA TAT GAT GTA AAA CTG ACT CCA AAA ATG AAT GTT
Asp Val Ser His Leu Tyr Asp Val Lys Leu Thr Pro Lys Met Asn Val
385 390 395400
ACA ATC AAA TTG TCT ATA CTT TAT GAT AAT GCT GAG TCT AAT GAT AAC Thr lle Lys Leu Ser lle Leu Tyr Asp Asn Ala Glu Ser Asn Asp Asn
405 410415
TCA ATT GGT AAA TGG ACA AAC ACA AAT ATT GTT TCA GGT GGA AAT AAC
Ser le Gly Lys Trp Thr Asn Thr Asn le Val Ser Gly Gly Asn Asn
420 425430
GGA AAA AAA CAA TAT TCT TCT AAT AAT CCG GAT GCT AAT TTG ACA TTA
Gly Lys Lys Gin Tyr Ser Ser Asn Asn Pro Asp Ala Asn Leu Thr Leu
435 440445
672
720
768
816
864
912
960
1008
1056
1104
1152
1200
1248
1296
1344
RO 117111 Bl
1392
2185
1440
AAT ACA GAT GCT CAA GAA AAA TTA AAT AAA AAT CGT GAC TAT TAT ATA
Asn Thr Asp Ala Gin Glu Lys Leu Asn Lys Asn Arg Asp Tyr Tyr Ile
450 455 460
AGT TTA TAT ATG AAG TCA GAA AAA AAC ACA CAA TGT GAG ATT ACT ATA
Ser Leu Tyr Met Lys Ser Glu Lys Asn Thr Gin Cys Glu Ile Thr Ile
465 470 475480
GAT GGG GAG ATT TAT CCG ATC ACT ACA AAA ACA GTG AAT GTG AAT AAA
Asp Gly Glu Ile Tyr Pro Hair Thr Thr Lys Thr Val Asn Val Asn Lys
485 490495
GAC AAT TAC AAA AGA TTA GAT ATT ATA GCT CAT AAT ATA AAA AGT AAT
Asp Asn Tyr Lys Arg Leu Asp Hair Hair Ala His Asn Hair Lys Ser Asn
500 505510
CCA ATT TCT TCA CTT CAT ATT AAA ACG AAT GAT GAA ATA ACT TTA TTT
Pro Ile Ser Ser Leu His Ile Lys Thr Asn Asp Glu Ile Thr Leu Phe
515 520525
TGG GAT GAT ATT TCT ATA ACA GAT GTA GCA TCA ATA AAA CCG GAA AAT
Trp Asp Asp Ile Ser Ile Thr Asp Val Ala Ser Ile Lys Pro Glu Asn
530 535540
TTA ACA GAT TCA GAA ACT AAA GAG ATT TAT AGT AGG TAT GGT ATT AAG
Leu Thr Asp Ser Glu Ile Lys Gin Ile Tyr Ser Arg Tyr Gly Ile Lys
545 550 555560
TTA GAA GAT GGA ATC CTT ATT GAT AAA AAA GGT GGG ATT CAT TAT GGT
Leu Glu Asp Gly Hair Leu Hair Asp Lys Lys Gly Gly Ile His Tyr Gly
565 570575
GAA TTT ACT AAT GAA GCT AGT TTT AAT ACT GAA CCA KG CCA AAT TAT
Glu Phe Ile Asn Glu Ala Ser Phe Asn Ile Glu Pro Leu Pro Asn Tyr
580 585590
GTG ACC AAA TAT GAA GTT ACT TAT AGT AGT GAG TTA GGA CCA AAC GTG
Val Thr Lys Tyr Glu Val Thr Tyr Ser Ser Glu Leu Gly Pro Asn Val
595 600605
AGT GAC ACA CTT GAA AGT GAT AAA ATT TAC AAG GAT GGG ACA ATT AAA
Ser Asp Thr Leu Glu Ser Asp Lys Ile Tyr Lys Asp Gly Thr Ile Lys
610 615620
TTT GAT TTT ACC AAA TAT AGT AAA AAT GAA CAA GGA TTA TTT TAT GAC
Phe Asp Phe Thr Lys Tyr Ser Lys Asn Glu Gin Gly Leu Phe Tyr Asp
625 630 635640
AGT GGA TTA AAT TGG GAC TTT AAA ACT AAT GCT ACT ACT TAT GAT GGT
Ser Gly Leu Asn Trp Asp Phe Lys Ile Asn Ala Ile Thr Tyr Asp Gly
645 650655
AAA GAG ATG AAT GTT TTT CAT AGA TAT AAT AAA TAG
Lys Glu Met Asn Val Phe His Arg Tyr Asn Lys
660665
1488
1536
1584
1632
1680
1728
1776
1824
1872
1920
1968
2190
2195
2200
2205
2210
2215
2220 (2) Information for SEQ ID NO: 7:
(i) sequence characteristics:
(a) length: 667 amino acids
2004
2225
RO 117111 Bl (b) type: amino acid (d) topology: linear (ii) molecule type: protein (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 7:
Met Lys Arg Glu Ile Asp Glu Asp Thr Asp Thr Asp Gly Asp Ser Ile 15 1015
Pro Asp Leu Trp Glu Glu Asn Gly Tyr Thr Ile Xaa Asn Arg Hair Ala
2530
Val Lys Trp Asp Asp Ser Leu Ala Ser Lys Gly Tyr Thr Lys Phe Val 35 4045
Ser Asn Pro Leu Glu Ser His Thr Val Gly Asp Pro Tyr Thr Asp Tyr 50 5560
Glu Lys Ala Ala Arg Asp Leu Asp Leu Ser Asn Ala Lys Glu Thr Phe 65 70 7580
Asn Pro Leu Val Ala Ala Phe Pro Ser Val Asn Va1 Ser Met Glu Lys 85 9095
Val Ile Leu Ser Pro Asn Glu Asn Leu Ser Asn Ser Val Glu Ser His 100 105110
Ser Ser Thr Asn Trp Ser Tyr Thr Asn Thr Glu Gly Ala Ser Val Glu
115 120125
Ala Gly Ile Gly Pro Lys Gly Ile Ser Phe Gly Val Ser Val Asn Tyr
130 135140
Gin His Ser Glu Thr Val Ala Gin Glu Trp Gly Thr Ser Thr Gly Asn 145 150 155160
Thr Ser Gin Phe Asn Thr Ala Ser Ala Gly Tyr Leu Asn Ala Asn Val 165 170175
Arg Tyr Asn Asn Val Gly Thr Gly Ala Hair Tyr Asp Val Lys Pro Thr
180 185190
Thr Ser Phe Val Leu Asn Asn Asp Thr Ile Ala Thr Ile Thr Ala Lys 195 200205
Ser Asn Ser Thr Ala Leu Asn Ile Ser Pro Gly Glu Ser Tyr Pro Lys 210 215220
Lys Gly Gin Asn Gly Hair Ala Hair Thr Ser Met Asp Asp Phe Asn Ser 225 230 235240
His Pro Ile Thr Leu Asn Lys Lys Gin Val Asp Asn Leu Leu Asn Asn
245 250255
Lys Pro Met Met Leu Glu Thr Asn Gin Thr Asp Gly Val Tyr Lys Ile
260 265270
Lys Asp Thr His Gly Asn Ile Val Thr Gly Gly Glu Trp Asn Gly Val
275 280285
Hair Gin Gin Hair Lys Ala Lys Thr Ala Ser Hair Hair Val Asp Asp Gly
290 295300
Glu Arg Val Ala Glu Lys Arg Val Ala Ala Lys Asp Tyr Glu Asn Pro 305 310 315320
RO 117111 Bl
Glu Asp Lys Thr Pro Ser Leu Thr Leu Lys Asp Ala Leu Lys Leu Ser 325 330335
Tyr Pro Asp Glu le Lys Glu lle Glu Gly Leu Leu Tyr Tyr Lys Asn
340 345350
Lys Pro lle Tyr Glu Ser Ser Val Met Thr Tyr Leu Asp Glu Asn Thr 355 360365
Ala Lys Glu Val Thr Lys Gin Leu Asn Asp Thr Thr Gly Lys Phe Lys 370 375380
Asp Val Ser His Leu Tyr Asp Val Lys Leu Thr Pro Lys Met Asn Val 385 390 395400
Thr lle Lys Leu Ser lle Leu Tyr Asp Asn Ala Glu Ser Asn Asp Asn 405 410415
Ser Gly Lys Trp Thr Asn Thr Asn Ser Val Gly Gly Asn Asn 420 425430
Gly Lys Lys Gin Tyr Ser Ser Asn Asn Pro Asp Ala Asn Leu Thr Leu 435 440445
Asn Thr Asp Ala Gin Glu Lys Leu Asn Lys Asn Arg Asp Tyr Tyr lle 450 455460
Ser Leu Tyr Met Lys Ser Glu Lys Asn Thr Gin Cys Glu lle Thr lle 465 470 475480
Asp Gly Glu lle Tyr Pro lle Thr Thr Lys Thr Val Asn Val Asn Lys
485 490495
Asp Asn Tyr Lys Arg Leu Asp li Ala His Asn li Lys Ser Asn
500 505510
Pro le Ser Ser Leu His lle Lys Thr Asn Asp Glu lle Thr Leu Phe 515 520525
Trp Asp Asp Him Be Him Thr Asp Val Ala Be Him Lys Pro Glu Asn 530 535540
Leu Thr Asp Ser Glu lle Lys Gin lle Tyr Ser Arg Tyr Gly lle Lys 545 550 555560
Leu Glu Asp Gly le Leu le Asp Lys Lys Gly Gly le His Tyr Gly
565 570575
Glu Phe lle Asn Glu Ala Ser Phe Asn lle Glu Pro Leu Pro Asn Tyr 580 585590
Val Thr Lys Tyr Glu Val Thr Tyr Ser Ser Glu Leu Gly Pro Asn Val 595 600605
Ser Asp Thr Leu Glu Ser Asp Lys le Tyr Lys Asp Gly Thr le Lys 610 615620
Phe Asp Phe Thr Lys Tyr Ser Lys Asn Glu Gin Gly Leu Phe Tyr Asp 625 630 635640
Ser Gly Leu Asn Trp Asp Phe Lys lle Asn Ala lle Thr Tyr Asp Gly 645 650655
Lys Glu Met Asn Val Phe His Arg Tyr Asn Lys
660665
2275
2280
2285
2290
2295
2300
2305
2310
2315
RO 117111 Bl (2) Information for SEQ ID NO: 8:
(i) sequence characteristics:
(a) length: 16 amino acids (b) type: amino acid (c) winding: simple (d) topology: linear (ii) molecule type: peptide (iii) hypothetical: not (v) fragment type: N-terminal (vi) original source:
(a) organism: Bacillus cereus (b) variety: AB78 (c) individual isolate: NRRL B-21058 (ix) characteristics:
(a) name / key: peptides (b) localization: 1 ... 16 (d) other information: / notes = "N-terminal sequence of purified protein from strain AB78" (xi) DESCRIPTION OF SEQUENCE: SEQ ID NO: 8 :
Lys Arg Glu lle Asp Glu Asp Thr Asp Thr Asx Gly Asp Ser lle Pro 15 10 15 (2) Information for SEQ ID NO: 9:
(i) sequence characteristics:
(a) length: 21 base pairs (b) type: nucleic acid (c) winding: simple (d) topology: linear (ii) molecule type: DNA (genomic) (iii) hypothetical: not (iii) anti-sense : no (ix) characteristics:
(a) name / key: mise feature (b) location: 1 ... 21 (d) other information: / notes = 'sample of oligonucleotides based on amino acids 3 to 9 of SEQ ID NO: 8, using Bacillus strain codon thuringiensis (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 9:
GAAATTGATC AAGATACNGA T 21
RO 117111 Bl
2365 (2) Information for SEQ ID NO: 10:
(i) sequence characteristics:
(a) length: 14 amino acids (b) type: amino acid (c) winding: simple (d) topology: linear (ii) molecule type: peptide (iii) hypothetical: not (v) fragment type: N-terminal (vi) original source:
(a) organism: Bacillus thuringiensis (b) variety: AB88 (ix) characteristics:
(a) name / key: peptides (b) localization: 1 ... 14 (d) other information: / notes = "N-terminal amino acid sequence of protein known as anion exchanger of fraction 23 (smallest)" (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 10:
Xaa Glu Pro Phe Val Ser Ala Xaa Xaa Xaa Gin Xaa Xaa Xaa
5 10 (2) Information for SEQ ID NO: 11:
(i) sequence characteristics:
(a) length: 13 amino acids (b) type: amino acid (c) winding: simple (d) topology: linear (ii) molecule type: peptide (iii) hypothetical: no (v) fragment type: N-terminal (vi) original source:
(a) organism: Bacillus thuringiensis (b) variety: ΑΒ8Θ (ix) characteristics:
(a) name / key: peptides (b) localization: 1 ... 13 (d) other information: / notes = "N-terminal amino acid sequence of protein known as anion exchanger of fraction 23 (highest)" (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 11:
Xaa Glu Tyr Glu Asn Val Glu Pro Phe Val Ser Ala Xaa
5 10
2370
2375
2380
2385
2390
2395
2400
2405
RO 117111 Bl (2) Information for SEQ ID NO: 12:
(i) sequence characteristics:
(a) length: 14 amino acids (b) type: amino acid (c) winding: simple (d) topology: linear (ii) molecule type: peptide (iii) hypothetical: not (v) fragment type: N-terminal (vi) original source:
(a) organism: Bacillus thurigiensis (b) variety: AB88 (ix) characteristics:
(a) name / key: peptides (b) location: 1 ... 14 (d) other information: / notes = "N-terminal sequence of VIP 80 kDa active against Agrotis ipsilon (XI) DESCRIPTION OF SEQUENCE: SEQ ID NO: 12:
Met Asn Lys Asn Asn Thr Lys Leu Pro Thr Arg Ala Leu Pro
10 (2) Information for SEQ ID NO: 13:
(i) sequence characteristics:
(a) length: 15 amino acids (b) type: amino acid (c) winding: simple (d) topology: linear (ii) molecule type: peptide (iii) hypothetical: not (v) fragment type: N-terminal (vi ) original source:
(a) organism: Bacillus thuringiensis (b) variety: AB88 (ix) characteristics:
(a) name / key: peptides (b) localization: 1 ... 15 (d) other information: / notes = "N-terminal amino acid sequence of 35 kDa VIP active against Agrotis ipsilon (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 13:
Ala Leu Ser Glu Asn Thr Gly Lys Asp Gly Gly Tyr Ile Val Pro
10 15
RO 117111 Bl
2455 (2) Information for SEQ ID NO: 14:
(i) sequence characteristics:
(a) length: 9 amino acids (b) type: amino acid (c) winding: simple (d) topology: linear (ii) molecule type: peptide (iii) hypothetical: not (v) fragment type: N-terminal (vi) original source:
(A) organism: Bacillus thuringiensis (ix) characteristics:
(a) name / key: peptides (b) location: 1 ... 9 (d) other information: / notes = "N-terminal sequence of 130kda delta-endotoxins"
2460
2465 (xi) DESCRIPTION OF THE SEQUENCE: SEQ ID NO: 14: Met Asp Asn Asn Pro Asn lle Asn Glu
5
2470 (2) Information for SEQ ID NO: 15:
(i) sequence characteristics:
(a) length: 9 amino acids
2475 (b) type: amino acid (c) winding: simple (d) topology: linear (ii) molecule type: peptide (iii) hypothetical: not (v) fragment type: N-terminal (ix) characteristics:
2480 (a) name / key: peptides (b) location: 1 ... 9 (d) other information: / notes = 80 kDa endotoxin "" N-terminal sequence of delta2485 (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 15 : Met Asp Asn Asn Pro Asn lle Asn Glu
5 (2) Information for SEQ ID NO: 16:
(i) sequence characteristics:
(a) length: 11 amino acids (b) type: amino acid (c) winding: simple (d) topology: linear
2490
2495
RO 117111 Bl (ii) molecule type: peptide (iii) hypothetical: no (v) fragment type: N-terminal (vi) original source:
(A) organism: Bacillus thuringiensis (ix) characteristics:
(a) name / key: peptides (b) location: 1 ... 11 (d) other information: / notes = "N-terminal sequence of 60 kDa deltaendotoxin" (xi) DESCRIPTION OF SEQUENCE: SEQ ID NO: 16:
Met Asn Val Leu Asn Ser Gly Arg Thr Thr lle
5 10 (2) Information for SEQ ID NO: 17:
(i) sequence characteristics:
(a) length: 2655 base pairs (b) type: nucleic acid (c) winding: simple (d) topology: linear (ii) molecule type: DNA (genomic) (iii) hypothetical: not (iii) anti-sense : no (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 17:
<td>ATGAAGAACA TGAAGAAGAA</td><td>GCTGGCCAGC</td><td>GTGGTGACCT</td><td>GCACCCTGCT</td>
<td>GGCCCCCATG 60 TTCCTGAACG GCAACGTGAA</td><td>CGCCGTGTAC</td><td>GCCGACAGCA</td><td>AGACCAACCA</td>
<td>GATCAGCACC 120 ACCCAGAAGA ACCAGCAGAA</td><td>GGAGATGGAC</td><td>CGCAAGGGCC</td><td>TGCTGGGCTA</td>
<td>CTACTTCAAG 180 GGCAAGGACT TCAGCAACCT</td><td>GACCATGTTC</td><td>GCCCCCACGC</td><td>GTGACAGCAC</td>
<td>CCTGATCTAC 240 GACCAGCAGA CCGCCAACAA</td><td>GCTGCTGGAC</td><td>AAGAAGCAGC</td><td>AGGAGTACCA</td>
<td>GAGCATCCGC 300 TGGATCGGCC TGATCCAGAG</td><td>CAAGGAGACC</td><td>GGCGACTTCA</td><td>CCTTCAACCT</td>
<td>GAGCGAGGAC 360 GAGCAGGCCA TCATCGAGAT</td><td>CAACGGCAAG</td><td>ATCATCAGCA</td><td>ACAAGGGCAA</td>
<td>GGAGAAGCAG 420 GTGGTGCACC TGGAGAAGGG</td><td>CAAGCTGGTG</td><td>CCCATCAAGA</td><td>TCGAGTACCA</td>
<td>GAGCGACACC 480 AAGTTCAACA TCGACAGCAA</td><td>GACCTTCAAG</td><td>GAGCTGAAGC</td><td>TTTTCAAGAT</td>
<td>CGACAGCCAG 540 AACCAGCCCC AGCAGGTGCA</td><td>GCAGGACGAG</td><td>CTGCGCAACC</td><td>CCGAGTTCAA</td>
<td>CAAGAAGGAG 600</td><td></td><td></td><td></td>
Contents173
1 sheet
Sheet 1
117 members in 34 offices
Priority claims2
| Document | Office | Kind | Date |
|---|---|---|---|
| 3705793 | United States of America | A | |
| 9403131 | United States of America | W |
Members117
| Document | Office | Kind | |
|---|---|---|---|
| CA2157297A1 | Canada | A1 | |
| WO9421795A1 | World Intellectual Property Organization (WIPO) | A1 | |
| AU6414294A | Australia | A | |
| HU9502466D0 | Hungary | D0 | |
| IL115382D0 | Israel | D0 | |
| BR9406484A | Brazil | A | |
| EP0690916A1 | European Patent Office (EPO) | A1 | |
| CZ247695A3 | Czechia | A3 | |
| CN1119877A | China | A | |
| SK117695A3 | Slovakia | A3 | |
| CA2199049A1 | Canada | A1 | |
| WO9610083A1 | World Intellectual Property Organization (WIPO) | A1 | |
| AU3743395A | Australia | A | |
| ZA958121B | South Africa | B | |
| TR199501182A2 | Türkiye | A2 | |
| HUT73337A | Hungary | A | |
| JPH08508164A | Japan | A | |
| NZ263445A | New Zealand | A | |
| BG100000A | Bulgaria | A | |
| MX9702212A | Mexico | A | |
| CO4480060A1 | Colombia | A1 | |
| EP0792363A1 | European Patent Office (EPO) | A1 | |
| CN1160420A | China | A | |
| BR9509099A | Brazil | A | |
| BG101384A | Bulgaria | A | |
| AU684068B2 | Australia | B2 | |
| HUT77449A | Hungary | A | |
| AU692934B2 | Australia | B2 | |
| US5770696A | United States of America | A | |
| JPH10506532A | Japan | A | |
| ZA982801B | South Africa | B | |
| CA2286284A1 | Canada | A1 | |
| WO9844137A2 | World Intellectual Property Organization (WIPO) | A2 | |
| AU6832598A | Australia | A | |
| US5840868A | United States of America | A | |
| US5849870A | United States of America | A | |
| WO9844137A3 | World Intellectual Property Organization (WIPO) | A3 | |
| US5866326A | United States of America | A | |
| US5872212A | United States of America | A | |
| US5877012A | United States of America | A | |
| US5888801A | United States of America | A | |
| US5889174A | United States of America | A | |
| US5990383A | United States of America | A | |
| MX9909043A | Mexico | A | |
| EP0972062A2 | European Patent Office (EPO) | A2 | |
| CZ90897A3 | Czechia | A3 | |
| BR9808483A | Brazil | A | |
| US6066783A | United States of America | A | |
| HU0000295A2 | Hungary | A2 | |
| HUP0000295A2 | Hungary | A2 | |
| PL336081A1 | Poland | A1 | |
| CN1256712A | China | A | |
| TR199902426T2 | Türkiye | T2 | |
| US6107279A | United States of America | A | |
| AR012219A1 | Argentina | A1 | |
| US6137033A | United States of America | A | |
| AU727218B2 | Australia | B2 | |
| KR20010006015A | Republic of Korea | A | |
| IL132039D0 | Israel | D0 | |
| US6291156B1 | United States of America | B1 | |
| BG63313B1 | Bulgaria | B1 | |
| RO117111B1This record | Romania | B1 | |
| JP2001524817A | Japan | A | |
| HU0000295A3 | Hungary | A3 | |
| HUP0000295A3 | Hungary | A3 | |
| SG49845A1 | Singapore | A1 | |
| HU220714B1 | Hungary | B1 | |
| US2002078473A1 | United States of America | A1 | |
| CZ290301B6 | Czechia | B6 | |
| IL146109D0 | Israel | D0 | |
| TW496896B | Taiwan Province of China | B | |
| US6429360B1 | United States of America | B1 | |
| PH11995051386B1 | Philippines | B1 | |
| CZ290801B6 | Czechia | B6 | |
| UA52579C2 | Ukraine | C2 | |
| RU2196824C2 | Russian Federation | C2 | |
| HU222264B1 | Hungary | B1 | |
| SK283509B6 | Slovakia | B6 | |
| EP0792363B1 | European Patent Office (EPO) | B1 | |
| AT256743T | Austria | T | |
| ATE256743T1 | Austria | T1 | |
| EP1382611A2 | European Patent Office (EPO) | A2 | |
| PH12002000307B1 | Philippines | B1 | |
| RU2222597C2 | Russian Federation | C2 | |
| DE69532333D1 | Germany | D1 | |
| MX219628B | Mexico | B | |
| EP1382611A3 | European Patent Office (EPO) | A3 | |
| DK0792363T3 | Denmark | T3 | |
| SI0792363T1 | Slovenia | T1 | |
| PT792363E | Portugal | E | |
| KR100419438B1 | Republic of Korea | B1 | |
| ES2213162T3 | Spain | T3 | |
| UA68345C2 | Ukraine | C2 | |
| DE69532333T2 | Germany | T2 | |
| EP1471145A2 | European Patent Office (EPO) | A2 | |
| EP0690916B1 | European Patent Office (EPO) | B1 | |
| IN710CH1998A | India | A | |
| AT290083T | Austria | T | |
| ATE290083T1 | Austria | T1 | |
| DE69434283D1 | Germany | D1 |
Numbers
- Application
- 9501654
Titles2
- English
- PESTICIDAL PROTEINE AND NUCLEOTIDE SEQUENCE ENCODING THE SAME
- Romanian
- PROTEINA PESTICIDA SI SECVENTA DE NUCLEOTIDE, CARE O CODIFICA
Classification
- CPC, 6
- C07K14/415
- C07K14/32
- C07K14/325
- C12N15/8286
- Y02A40/146
- A01N63/50
- IPC, 19
- A01H5 00
- A01H6 14
- A01H6 20
- A01H6 46
- A01H6 54
- A01H6 60
- A01H6 82
- A01N63 50
- C07K14 32
- C07K14 325
- C07K14 415
- C12N1 21
- C12N5 10
- C12N15 09
- C12N15 31
- C12N15 32
- C12N15 82
- C12P21 02
- C12P21 08