Gene detection assay for improving the likelihood of an effective response to an erbb antagonist cancer therapy
Abstract
The invention provides a method for more effective treatment of patients susceptible to or diagnosed with tumors overexpressing ErbB, as determined by a gene amplification assay, with an ErbB antagonist. Such method comprises administering a cancer-treating dose of the ErbB antagonist, preferably in addition to chemotherapeutic agents, to a subject in whose tumor cells ErbB has been found to be amplified e.g., by fluorescent in situ hybridization. ErbB antagonists described include an anti-HER2 antibody. Pharmaceutical packaging for providing the components for such treatment is also provided.
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Expired 18 May 2021, 5.4 years ago.
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17 claims: 3 independent, 14 dependent
- 1Zastosowanie antagonisty ErbB, który jest przeciwciałem przeciwko białku HER2 do wytwarzania leku do leczenia raka u osobnika, przy czym osobnik ten jest tym, dla którego stwierdzono amplifikację genu her2 w komórkach raka w próbce tkanki od tego osobnika i komórki raka u tego osobnika posiadają ekspresję HER2 na poziomie 0 lub 1+ potwierdzoną immunohistochemicznie w próbce tkanki utrwalonej formaldehydem.
- 2Zastosowanie według zastrz. 1, znamienne tym, że rakiem jest rak sutka.
- 3Zastosowanie według zastrz. 1, znamienne tym, że przeciwciałem jest rekombinowane ludzkie przeciwciało monoklonalne rhuMAb 4D5-8.
- 4Zastosowanie według zastrz. 1, znamienne tym, że określono w pierwszej analizie, że komórki raka u tego osobnika posiadają ekspresję HER2 na poziomie 0 lub 1+ potwierdzoną immunohistochemicznie w próbce tkanki utrwalonej formaldehydem. PL 217 410 B1
- 5Zastosowanie według zastrz. 4, znamienne tym, że po pierwszej analizie następuje druga analiza, w której określono, że osobnik jest tym, dla którego stwierdzono amplifikację genu her2 w komórkach raka w próbce tkanki od tego osobnika, przy czym amplifikację genu her2 wykrywa się przez detekcję fluorescencji sondy kwasu nukleinowego znakowanej fluorescencyjnie, shybrydyzowanej z tym genem.
- 6Zastosowanie według któregokolwiek z zastrz. 1 do 5, znamienne tym, że lek jest do podawania w metodzie leczenia, która obejmuje ponadto leczenie raka dawką leku chemioterapeutycznego.
- 7Zastosowanie według zastrz. 6, znamienne tym, że lek chemioterapeutyczny jest taksoidem.
- 8Sposób identyfikacji pacjenta skłonnego do korzystnej odpowiedzi na antagonistę ErbB przy leczeniu raka, przy czym antagonista ErbB jest przeciwciałem przeciwko białku HER2, znamienny tym, że wykrywa się amplifikację genu her2 w komórkach nowotworowych w próbce tkanki od pacjenta, przy czym komórki raka pacjenta posiadają ekspresję HER2 na poziomie 0 lub 1+ potwierdzoną immunohistochemiczne w próbce tkanki utrwalonej formaldehydem.
- 9Sposób według zastrz. 8, znamienny tym, że określono w pierwszej analizie, że komórki raka u tego osobnika posiadają ekspresję HER2 na poziomie 0 lub 1+ potwierdzoną immunohistochemicznie w próbce tkanki utrwalonej formaldehydem.
- 10Sposób według zastrz. 9, znamienny tym, że po pierwszej analizie następuje druga analiza, w której określono, że osobnik jest tym, dla którego stwierdzono amplifikację genu her2 w komórkach raka w próbce tkanki od tego osobnika, przy czym amplifikację genu her2 wykrywa się przez detekcję fluorescencji sondy kwasu nukleinowego znakowanej fluorescencyjnie, shybrydyzowanej z tym genem.
- 11Antagonista ErbB do zastosowania w metodzie leczenia raka u osobnika, przy czym antagonista ErbB jest przeciwciałem przeciwko białku HER2, przy czym osobnik ten jest tym dla którego stwierdzono amplifikację genu her2 w komórkach raka w próbce tkanki od tego osobnika i komórki raka u tego osobnika posiadają ekspresję HER2 na poziomie 0 lub 1+ potwierdzoną immunohistochemicznie w próbce tkanki utrwalonej formaldehydem.
- 12Antagonista Erb według zastrz. 11, znamienny tym, że rakiem jest rak sutka.
- 13Antagonista Erb według zastrz. 11, znamienny tym, że przeciwciałem jest rekombinowane ludzkie przeciwciało monoklonalne rhuMAb 4D5-8.
- 14Antagonista Erb według zastrz. 11, znamienny tym, że określono w pierwszej analizie, że komórki raka u tego osobnika posiadają ekspresję HER2 na poziomie 0 lub 1+ potwierdzoną immunohistochemicznie w próbce tkanki utrwalonej formaldehydem.
- 15Antagonista Erb według zastrz. 14, znamienny tym, że po pierwszej analizie następuje druga analiza, w której określono, że osobnik jest tym, dla którego stwierdzono amplifikację genu her2 w komórkach raka w próbce tkanki od tego osobnika, przy czym amplifikację genu her2 wykrywa się przez detekcję fluorescencji sondy kwasu nukleinowego znakowanej fluorescencyjnie, shybrydyzowanej z tym genem.
- 16Antagonista Erb według któregokolwiek z zastrz. 11 do 15, znamienny tym, że metoda leczenia obejmuje ponadto leczenie raka dawką leku chemioterapeutycznego.
- 17Antagonista Erb według zastrz. 16, znamienny tym, że lek chemioterapeutyczny jest takso-
Independent claims17
220 paragraphs in 6 sections, as filed
The invention relates to the use of an ErbB antagonist, an ErbB antagonist for use in a method of treating cancer, and a method of identifying a patient prone to a favorable response to an ErbB antagonist in the treatment of cancer. The invention finds utility in the treatment of cancers over-expressed by a neoplastic antigen, such as the ErbB receptor, especially HER2. More particularly, the invention relates to more effective treatment of human patients susceptible to or diagnosed as having cancer, in which tumor cells overexpress ErbB as determined by an attempt to amplify (amplify) the gene with an ErbB antagonist, e.g. an anti-ErbB antibody.
Background of the invention
Advances in the understanding of genetics and improvements in technology and epidemiology have made it possible to correlate genetic abnormalities with certain malignancies of tumors as well as to estimate the risk of an individual in terms of developing certain malignancies of tumors. However, most of the methodologies available for assessing tissue for the presence of genes associated with or predisposing an individual to tumor malignancy have well-known disadvantages. For example, methods that require tissue breakdown, such as Southern, Northern, or Western blot analyzes are considered less accurate due to the dilution of malignant cells with normal ones, or, non-malignant cells are present in the same tissue. Moreover, the resulting loss of tissue architecture rules out the possibility of correlating malignant cells with the presence of genetic abnormalities in the context of morphological specificity. This issue is especially problematic for the types of tissue known to be heterogeneous, such as human breast cancer, where a significant percentage of the cells present in the entire area may be benign.
The her2 / neu gene encodes a protein product, often identified as p185HER2. The native p185HER2 protein is a receptor-like membrane molecule which shares homology with the epidermal growth factor receptor (EGFR). HER2 amplification and overexpression in human breast cancer have been correlated in some studies with a shorter period of disease-free and shorter overall survival (van de Vijer et al., New Eng. J. Med. 317: 1239 (1988); Walker et al., Br. J. Cancer 60: 426 (1989); Tandon et al., J.Clin.Invest. 7: 1120 (1989); Wright et al., Cancer Res. 49: 2087 (1989); McCann et al., Cancer Res. 51: 3296 (1991); Paterson et al., Cancer Res. 51: 556 (1991) and Winstanley et al., Br. J. Cancer 63: 447 (1991)) but not others (Zhou et al., Oncogene 4: 105 (1989); Heintz et al., Arch. Path Lab Med 114 : 160 (1990); Kury et al., Eur. J. Cancer 26: 946 (1990); Clark et al., Cancer Res. 51: 944 (1991) and Ravdin et al., J. Clin. Oncol. 12: 467-74 (1994)).
In an initial assessment of 103 breast cancer patients, those who had more than three tumor-positive axillary lymph nodes (positive nodes) were more likely to over-express the HER2 protein than those with fewer than three positive nodes (Slamon and others, Science, 235: 177 (1987)). In a subsequent review of 86 breast cancer patients with positive nodes, there was a significant correlation between the extent of the gene duplication, early relapse, and short survival. HER2 overexpression was determined using Southern and Northern blotting which correlate with HER2 oncoprotein expression as assessed by Western blotting and immunohistochemistry (IHC) (Slamon et al., Science 235: 177 (1987); Slamon et al., Science 244: 707 (1989) ). It turned out that the average survival time was approximately 5 times shorter in the patients with more than five copies of the her2 gene than in the patients without the gene duplication. This correlation occurred even after correction for nodal status and other prognostic factors in the multivariate analyzes. These studies were extended to 187 positive node positive patients and showed that gene duplication, increased mRNA (determined by Northern blotting), and increased protein expression (determined by immunohistochemistry) were also correlated with decreased survival time (Slamon et al., Science 244: 707 (1989)); (see also U.S. Patent No. 4,968,603). Nelson et al, compared amplification of the her2 / neu gene using FISH with immunohistochemically determined overexpression in breast cancer (Nelson et al., Modern Pathology 9 (1) 21A (1996)).
Immunohistochemical staining of tissue sections has proven to be a reliable method for assessing protein changes in heterogeneous tissue. An immunohistochemistry (IHC) technique uses an antibody to probe for and visualize cellular antigens in situ, generally by chromogenic or fluorescent methods. This technique is the best as it avoids the undesirable disruption effects and allows individual cells to be assessed for morphology. Moreover, the target protein is not altered by the freezing processes.
However, in clinical trials (CTA), IHC of formaldehyde-fixed, paraffin-embedded tissue samples showed only 50-80% sensitivity with respect to frozen IHC samples (Press, Cancer Research 54: 2771 (1994)). Thus, IHC can lead to false-negative results, excluding patients who might benefit from treatment.
In situ fluorescence hybridization is a recently developed method to directly assess the presence of genes in intact cells. FISH is an attractive method of assessing paraffin-embedded tissue for the presence of malignancy as it provides cell specificity to overcome cross-linking problems and other protein-altering effects caused by formalin fixation. FISH has historically been linked to classical staining methods in an attempt to correlate genetic abnormalities with cellular morphology (see e.g., Anastasi et al., Blood 77: 2456-2462 (1991); Anastasi et al. Blood 79: 1796-1801 (1992); Anastasi and et al., Blood 81: 1580-1585 (1993); van Lom et al., Blood 82: 884-888 (1992); Wolman et al., Diagnostic Molecular Pathology 1 (3): 192-199 (1992); Zitzelberger, Journal of Pathology 172: 325-335 (1994)).
To date, there has been no correlation of the her2 gene duplication with the result of anti-HER2 antibody treatment, only with disease prognosis. The standard assay was IHC on formalin-fixed, paraffin-embedded samples. These samples, when scored 3+ or 2+, identify patients who are likely to benefit from treatment with an anti-HER2 antibody such as Herceptin®. The 3+ and 2+ scores correlate with the amplification of the her2 gene, e.g. in the FISH test. However, there remains a need to more effectively identify candidates for a satisfactory ErbB antagonist therapy such as treatment with Herceptin®.
WO99 / 31140 and WO01 / 15730 disclose an ErbB antagonist and its use against HER2 protein for the treatment of breast cancer of a patient found to have amplified the her2 gene in HER2 expressing cancer cells. These publications also disclose a method for identifying a patient prone to a favorable response to an ErbB antagonist in the treatment of cancer by detecting duplication of the erbB gene in tumor cells.
However, the inventions disclosed in these publications relate to the treatment of different classes of patients having HER2 expression levels 2+ or 3+ as determined by IHC.
Summary of the invention
The invention relates to the use of an ErbB antagonist which is an antibody against a HER2 protein in the manufacture of a medicament for treating cancer in a subject, the subject being one that has been found to amplify the her2 gene in cancer cells in a tissue sample from that subject and a cancer cell in the subject. have HER2 expression 0 or 1+ confirmed by immunohistochemistry in a tissue sample fixed with formaldehyde.
Preferably, the cancer is breast cancer.
Preferably, the antibody is a recombinant human rhuMAb 4D5-8 monoclonal antibody.
Preferably, it has been determined in a first analysis that the cancer cells in this individual have a HER2 expression of 0 or 1+ confirmed by immunohistochemistry in a formaldehyde-fixed tissue sample.
More preferably, the first analysis is followed by a second analysis in which it is determined that the subject is one that has been found to have amplified the her2 gene in cancer cells in a tissue sample from that individual, wherein the her2 gene amplification is detected by detecting the fluorescence of a fluorescently labeled nucleic acid probe. shy with this gene.
Preferably, the medicament is for administration in a method of treatment that further comprises treating the cancer with a dose of the chemotherapeutic drug.
More preferably, the chemotherapeutic drug is a taxoid.
The invention also relates to a method for identifying a patient prone to a favorable response to an ErbB antagonist in the treatment of cancer, the ErbB antagonist being an antibody against the HER2 protein, characterized in that amplification of the her2 gene in tumor cells is detected in a tissue sample from the patient, the cancer cells being the patient has HER2 expression 0 or 1+ confirmed by immunohistochemistry in a formaldehyde-fixed tissue sample.
Preferably, it has been determined in a first analysis that the cancer cells in this individual have a HER2 expression of 0 or 1+ confirmed by immunohistochemistry in a formaldehyde-fixed tissue sample.
PL 217 410 B1
More preferably, the first analysis is followed by a second analysis in which it is determined that the subject is one that has been found to have amplified the her2 gene in cancer cells in a tissue sample from that individual, wherein the her2 gene amplification is detected by detecting the fluorescence of a fluorescently labeled nucleic acid probe. shy with this gene.
The invention further provides an ErbB antagonist for use in a method of treating cancer in a subject, wherein the ErbB antagonist is an antibody against the HER2 protein, the subject being one that has been found to amplify the her2 gene in cancer cells in a tissue sample from the subject and the cancer cell in the subject. of this individual have HER2 expression levels 0 or 1+ confirmed by immunohistochemistry in a formaldehyde-fixed tissue sample.
Preferably, the cancer is breast cancer.
Preferably, the antibody is a recombinant human rhuMAb 4D5-8 monoclonal antibody.
Preferably, it has been determined in a first analysis that the cancer cells in this individual have a HER2 expression of 0 or 1+ confirmed by immunohistochemistry in a formaldehyde-fixed tissue sample.
More preferably, the first analysis is followed by a second analysis in which it is determined that the subject is one that has been found to have amplified the her2 gene in cancer cells in a tissue sample from that individual, wherein the her2 gene amplification is detected by detecting the fluorescence of a fluorescently labeled nucleic acid probe. shy with this gene.
Preferably, the method of treatment further comprises treating the cancer with a dose of a chemotherapeutic drug.
More preferably, the chemotherapeutic drug is a taxoid.
Unexpected clinical results underpin the invention, in which gene amplification has been shown to be a more effective indicator of antibody-based cancer therapy than protein detection by immunohistochemistry, and extends to tumor antigens in general. Thus, any therapy based on an antibody to a specific tumor antigen may be more likely to be successful in patients who have been found to have gene duplication of the tumor antigen gene.
A particular advantage of the invention is that it allows the selection of patients for treatment who would be excluded on the basis of immunohistochemical criteria. Thus, in a specific embodiment, an antigen level corresponding to a 0 or 1+ HER2 score by immunohistochemistry has been detected in the subject on the formaldehyde-fixed tissue sample.
The description of the present invention further discloses a pharmaceutical pack containing an ErbB antagonist for treating cancer and instructions for administering the ErbB antagonist to a subject if the erbB gene in tumor cells in a tissue sample from the subject is amplified. Preferably, the ErbB antagonist is an anti-ErbB antibody, such as an anti-HER2 antibody. The instructions also teach to administer a cancer therapeutic dose of a chemotherapeutic agent, e.g., taxol. Such pharmaceutical packages, together with instructions for use, can be provided for any tumor specific antibody therapeutic agent.
Detailed description
The present invention advantageously allows the treatment of patients with a higher likelihood of responding to treatment by administering therapeutic agents, i.e. therapeutic anti-tumor antigen antibodies or ErbB receptor antagonists, to patients who have a duplicate gene encoding such a tumor antigen or ErbB receptor protein. The invention is based, in part, on the unexpected discovery that the amplification of the her2 gene, e.g. as detected by fluorescence in situ hybridization (FISH), while correlating with HER2 expression as detected by immunohistochemistry (IHC), provides a more accurate basis for selecting patients for treatment as the FISH status unexpectedly correlates better with treatment response. This result was surprising in part because the FISH status has approximately the same correlation coefficient with the Clinical Trials IHC (CTA) assay as the other IHC assay (HercepTest). Based on this observation, FISH should have a similar correlation with treatment response. This result is also surprising because direct protein measurement (by immunoassay) should provide a more accurate estimate of protein-directed cancer therapy than indirect expression measurement such as gene duplication.
Assessment of patient groups and subgroups demonstrates the strength of gene duplication analysis in selecting patients who are more likely to respond to treatment. IHC provides scores for HER2 expression on tumor cells: 0 (no expression) to 3+ (very high expression level). Clinical selection criteria exclude patients with scores of 0 and 1+ and select patients
PL 217 410 B1 with a score of 2+ and 3+. The data show that a total of 14% of 2 + / 3 + patients responded to Herceptin®, while 20% of FISH + patients (duplicated her2 gene) responded to Herceptin®. Subgroup 3+ has a response rate of 17% which is very close to the response rate of FISH + subjects.
However, the subgroup 2+ has less than half the response rate of FISH + subjects. Thus, gene duplication clearly differentiates large subpopulations in the 2+ subgroup allowing more effective treatment for those who are FISH + and rapidly identifying patients for whom alternative treatment modalities are appropriate and should initiate them immediately.
Gene duplication analysis also identifies patients who are unnecessarily excluded due to anomalies in the IHC analysis, especially when testing is performed on formalin-fixed, paraffin-embedded samples (such sample processing may tear or destroy antibody epitopes on the HER2 protein but has much less effect. for gene duplication tests). As shown in the examples, the subset of individuals 0 and 1+ is FISH +. These patients are likely to respond to therapy with an anti-HER2 antibody, e.g., Herceptin®, although according to IHC criteria, they would be excluded from receiving this treatment.
Thus, the present invention advantageously allows the introduction of patients who are more likely to benefit from treatment but who, according to standard IHC criteria, would be excluded from treatment. At the same time, the invention allows the exclusion of patients who should promptly seek an alternative treatment, since anti-tumor antigen therapy (ie, an ErbB antagonist or a therapeutic antibody specific for a tumor antigen) is likely to fail.
In short, the present invention is a powerful helper in IHC attempts to select patients based on the expression level of the target protein. It can also be used as such, that is, without IHC, providing initial screening and patient selection. The invention significantly improves the screening and selection of subjects to receive a cancer-treating dose of treatment with a therapeutic antibody against a tumor antigen, treatment with an ErbB receptor antagonist, and other treatments targeting overexpressed tumor antigens (or tumor specific antigens), resulting in an increased likelihood of benefit from such treatment.
The description of the present invention discloses an article of manufacture and a package containing a container, a composition in a container containing an ErbB antagonist e.g. anti-ErbB antibodies (or other antigen-specific anti-tumor antibody), optionally a label on or accompanying the container that indicates that the composition can be used to treat a condition characterized by overexpression of the ErbB receptor, and a package cartridge containing instructions for administering the antagonist to patients, whose duplicate erbB gene has been detected.
Definitions
As used herein, "ErbB receptor" is a tyrosine kinase protein receptor that belongs to the ErbB family of receptors and includes EGFR, ErbB3, and ErbB4 receptors, as well as TEGFR (US Patent No. to be identified in the future. The ErbB receptor will generally include an extracellular domain that can bind an ErbB ligand; lipophilic integral domain; a conserved intracellular tyrosine kinase domain; and a carboxyterminal signaling domain comprising several tyrosine residues which may be phosphorylated. The ErbB receptor may be the native sequence of the ErbB receptor or a variant amino acid sequence thereof. Preferably, the ErbB receptor is the native sequence of the human ErbB receptor.
ErbB receptors are an example of tumor specific or tumor antigens. The term "tumor antigen is used herein to refer to a protein that is expressed at a high level on tumor cells as compared to normal cells. In general, normal cells for comparison are derived from the same type of tissue, especially phenotype, as the tumor or from which the tumor arose. "A tumor specific antigen refers to an antigen that is expressed either predominantly or solely on the cells of the tumor. Examples of tumor specific antigens are, in addition to the ErbGB receptors, MART1Melan A, gp-100 and tyrosinase (in melanoma); MAGE-1 and MAGE-3 (in bladder, head and neck and non-small cell cancers); HPVEG and E7 proteins (in cervical cancer); Mucin / MUC-1 (in breast, pancreatic, colon and prostate cancers); prostate specific / PSA antigens (in prostate cancer); and carcino-embryonic antigen / CEA (in colon, breast and gastrointestinal cancers).
PL 217 410 B1
By "amplification" is meant the presence of one or more additional copies of the erbB gene or another tumor antigen-encoding gene in addition to the chromosome. Gene amplification can result in protein overexpression, e.g., an ErbB receptor protein. Gene amplification in cells from a tissue sample can be measured by a number of techniques, notably fluorescence in situ hybridization (FISH), but also including, but not limited to, quantitative PCR, quantitative Southern hybridization, and the like.
By "tissue sample" is meant a collection of similar cells obtained from a tissue of a subject or patient, preferably comprising cells with nuclei containing chromosomal material. The four major human tissues are (1) epithelium; (2) connective tissues, including blood vessels, bone, and cartilage; (3) muscle tissue; and (4) nervous tissue. The source of the tissue sample may be solid tissue, such as from a fresh, frozen, and / or preserved sample, or from a biopsy or aspirate of an organ or tissue; blood or any blood component; body fluids such as cerebrospinal fluid, amniotic fluid, peritoneal fluid, or intestinal fluid; cells from any stage of pregnancy or development of the subject. The tissue sample can also be primary or cultured cells or cell lines. The tissue sample may contain compounds that are never actually associated with the tissue in nature, such as preservatives, anticoagulants, buffers, fixatives, nutrients, antibiotics, and more. In one embodiment, the tissue sample is "non-haematological tissue (that is, not blood or bone marrow tissue).
For purposes herein, "a section of a tissue sample is understood to mean a single piece or piece of a tissue sample, e.g., a thin section of tissue or cells cut from a tissue sample. It is understood that multiple sections of tissue samples may be taken and analyzed in accordance with the present invention, provided that it is understood that the present invention encompasses a method by which the same section of a tissue sample can be analyzed, both on a morphological and molecular level. or it can be analyzed for both protein and nucleic acid.
By "correlate or" correlating is meant comparing, in any way, the performance and / or the results of the first analysis with the performance and / or the results of the second analysis. For example, the results of the first analysis can be used in performing the second analysis, and / or the results of the first analysis can be used to determine if a second analysis should be performed and / or the results of the first analysis can be compared with the results of the second analysis. With respect to IHC combined with FISH, the results of the IHC can be used to determine if FISH should be performed and / or the level of protein expression can be compared with the amplification of the gene to further characterize a tumor biopsy (e.g. to compare HER2 protein expression with the amplification of the her2 gene). One of the advantageous features of the invention is the ability to identify patients who are likely to benefit from treatment using FISH even when IHC shows that they have low antigen levels.
By "nucleic acid" is meant any DNA or RNA, e.g., chromosomal, mitochondrial, viral, and / or bacterial nucleic acid present in a tissue sample. The term "nucleic acid" includes either one or both strands of a double-stranded nucleic acid molecule, and includes any fragment or portion of an undamaged nucleic acid molecule.
By "gene" is meant any nucleic acid sequence or portion thereof having a functional role in coding or transcribing RNA (rRNA, tRNA or mRNA, the latter being capable of being translated as a protein) or regulating the expression of another gene. A gene may consist of all the nucleic acids that are responsible for encoding a functional protein, or only parts of the nucleic acids that are responsible for encoding or expressing the protein. The nucleic acid sequence may contain a genetic abnormality within exons, introns, initiation or termination regions, promoter sequences, other regulatory sequences, or unique gene contiguous regions.
By "ErbB ligand" is meant a polypeptide that binds and / or activates an ErbB receptor. The ErbB ligand of particular interest in the present invention is the native sequence of a human ErbB ligand, such as epidermal growth factor (EGF) (Savage et al., J. Biol. Chem. 247: 7612-7621 (1972)); transforming growth factor alpha (TGF-alpha) (Marquardt et al., Science 223: 1079-1082 (1984)); amphiregulin, also known as neuroblastoma or keratinocyte autocrine growth factor (Shoyab et al., Science, 243: 1074-1076 (1989); Kimura et al., Nature 348: 257-260 (1990); and Cook et al., Mol. Cell . Biol. 11: 2547-2557 (1991)); betacellulin (Shing et al., Science 259: 1604-1607 (1993); and Sasada et al., Blochem. Biophys. Res. Commun. 190: 1173
PL 217 410 B1 (1993)); heparin binding epidermal growth factor (Toyoda et al., J. Biol. Chem. 270: 7495-7500 (1995); and Komurasaki et al., Oncogene 15: 2841-2848 (1997)), heregulin (see below); neuregulin-2 (NRG-2) (Carraway et al., Nature 387: 512-516 (1997)); neuregulin-3 (NRG-3) (Zhang et al., Proc. Natl. Acad. Sci. USA 94: 9562-9567 (1997)); or krypto (CR-1) (Kannan et al., J. Biol. Chem. 272 (6): 33303335 (1997)). ErbB ligands that bind EGRF include EGF, TGF-alpha, amphiregulin, betacellulin, andepiregulin HB-EGF. ErbB ligands that bind HER3 include heregulins. ErbB ligands capable of binding HER4 include betacellulin, epiregulin, HB-EGF, NRG-2, NRG-3, and heregulins.
"Heregulin (HRG) as used herein refers to a polypeptide comprising the amino acid sequence encoded by a heregulin gene product as disclosed in US Patent No. 5,641,869 or Marchionni et al., Nature 362: 312-318 (1993) and biologically active variants of such polypeptides. Examples of heregulins are heregulin-alfa, heregulinabetal, heregulin-beta2, and heregulin-beta3 (Holmes et al., Science, 256: 1205-1210 (1992); and US Patent No. 5
641 869); neu differentiation factor (NDF) (Peles et al., Cell 69: 205-216 (1992)); acetylcholine receptor (ARIA) inducing activity (Falls et al., Cell 72: 801-815 (1993)); glial growth factors (GGF) (Marchionni et al., Nature, 362: 312-318 (1993)); sensory and motor neuron-derived factor (SMDF) (Ho et al., J.Biol.Chem. 270: 14523-14532 (1995)); gamma-heregulin (Schaefer et al., Oncogene 15: 1385-1394 (1997)). An example of a biologically active fragment / amino acid sequence variant of a native HRG polypeptide sequence is an EGF-like domain fragment (e.g., HRG-betal, 177-244).
"ErbB hetero-oligomer as used herein means a non-covalently linked oligomer comprising at least two different ErbB receptors. Such complexes can form when a cell expressing two or more ErbB receptors is exposed to an ErbB ligand and can be isolated by immunoprecipitation and analyzed by SDS-PAGE, e.g. as described in Sliwkowski et al. (J.Biol.Chem. 269) : (20): 14661-14665)). Examples of such ErbB heterooligomers are the EGFR-HER2, HER2-HER3 and HER3-HER4 complexes. In addition, the ErbB heterooligomer can include two or more HER2 receptors linked to another ErbB receptor such as HER3, HER4 or EGFR. The hetero-oligomer can include other proteins, such as a cytokine receptor subunit (e.g., gp130).
The terms "ErbB1," epidermal growth factor receptor, and "EGFR are used interchangeably herein and refer to the native EGFR sequence as described, e.g., by Carpenter et al. (Ann. Rev. Biochem. 56: 881-914 (1987)) including variants thereof (e.g., an EGFR deletion mutant such as in Humphrey et al. (Proc. Natl. Acad. Sci. USA 87: 4207-4211 (1990)). ErbB1 refers to a gene encoding an EGFR protein product. Examples of antibodies that bind to EGFR include Mab579 (ATCC CRL HB 8506), Mab455 (ATCC CRL HB 8507), Mab225 (ATCC CRL 8508), Mab 528 (ATCC CRL 8509) (see U.S. Patent No. 4,943,533), and variants thereof, such as converted to chimeras 225 (C225) and converted human 225 (H225) (see PCT Publication No. WO 96/40210).
The expressions "ErbB2 and" HER2 are used interchangeably herein and refer to the native sequence of the human HER2 protein as described in e.g. Semba I others (Proc. Natl. Acad. Sci. USA 82: 6497-6501 (1985)) and Yamamoto and others (Nature 319: 230-234 (1986)) (Genebank accession number X03363) and variants thereof. The term erbB2 refers to the gene encoding human HER2 and neu refers to the gene encoding rat p185neu. Preferably HER2 is the native sequence of human HER2. Examples of antibodies that bind to HER2 include MAb4D5 (ATCC CRL 10463), 2C4 (ATCC HB-12697), 7F3 (ATCC HB-12216), and 7C2 (ATCC HB-12215) (see US Patent No. 5,772,997; PCT No. WO 98/77797; and U.S. Patent No. 5,840,525, specially incorporated herein by reference). Humanized anti-HER2 antibodies include huMAb4D5-1, huMAb4D5-2, huMAb4D5-3, huMAb4D5-4, huMAb4D5-5, huMAb4D5-6, huMAb4D5-7, and huMAb4D5-8 (Herceptin®) as described in US Patent No. 3. 5,821,337, which is specifically incorporated herein by reference; and humanized 520C9 (PCT Publication No. WO 93/21319). Human anti-HER2 antibodies are described in US Patent No. 5,772,997 and PCT Publication No. WO 97/00271.
"ErbB3 and" HER3 refer to a receptor polypeptide as described e.g. in U.S. Patent Nos. 5,183,884 and 5,480,968 as well as by Kraus et al. (Proc.Natl.Acad.Sci.USA) 86: 9193-9197 ( 1989)), including its variants. Exemplary antibodies that bind HER3 are described in US Patent No. 5,968,511, e.g., antibody 8B8 (ATCC HB-12070) or a humanized variant thereof. The terms "ErbB4 and" HER4 as used herein refer to a polypeptide
A receptor as described, for example, in European Application No. EP 599 274; by Plowman et al (Proc. Natl. Acad. Sci. USA 90: 1746-1750 (1993)); and Plowman et al (Nature, 366: 473-475 (1993)), including variants thereof such as the HER4 isoforms described in PCT Publication No. WO 99/19488.
"ErbB antagonist is any molecule that binds to and blocks ligand activation of an ErbB receptor. Such antagonists include, but are not limited to, modified ligands, ligand peptides (i.e. ligand fragments), soluble ErbB receptors, and preferably anti-ErbB antibodies.
“Treatment refers to both the therapeutic effect and the prophylactic or preventative measures. The group in need of treatment includes those who already have the condition as well as those who need prevention.
"Mammal for treatment purposes refers to any animal classified as a mammal, including humans, domestic and farm animals, and zoo animals, sports, pets, such as dogs, horses, cats, cows, etc." Preferably, the mammal is human.
"Disease is any condition that would benefit from treatment with an ErbB antagonist, e.g. with an anti-ErbB2 antibody, and more generally, any cancer in which administration of an antibody against an overexpressed antigen can treat the cancer." This includes chronic and acute conditions or diseases, including those pathological conditions which predispose the mammal to the condition in question. Non-limiting examples of conditions treated as disclosed herein include benign and malignant neoplasms; leukemias and malignant lymphoid neoplasms; neuronal, glial, stellate, hypothalamic and other glandular, macrophage, epithelial, stromal and biastocelic diseases; and inflammatory, angiogenic and immune diseases.
The term "therapeutically effective amount is used to refer to an amount having an anti-proliferative effect. Preferably, a therapeutically effective amount induces antibody mediated cytotoxicity, activates complement, has apoptotic activity, or enables the induction of cell death, and preferably the death of benign or malignant neoplastic cells, in particular cancer cells. Efficacy can be measured by conventional means, depending on the condition being treated. For cancer therapy, efficacy can be measured, e.g., by assessing disease progression time (ITP), survival, tumor size, or by determining response factors (see example below).
The terms "cancer and" cancerous "refer to or describe the physiological condition in mammals that is typically characterized by unregulated cell growth. Examples of cancers include, but are not limited to, cancer, lymphoma, blastoma, sarcoma, melanoma, and leukemia. More specific examples of such cancers include squamous cell carcinoma, small cell lung carcinoma, non-small cell lung carcinoma, lung adenocarcinoma, lung squamous carcinoma, peritoneal carcinoma, liver cell carcinoma, gastrointestinal carcinoma, pancreatic carcinoma, glioma, cervical carcinoma, ovarian carcinoma, liver cancer, bladder cancer, hepatoma, breast cancer, colon cancer, colon and rectal cancer, endometrial or uterine cancer, salivary gland cancer, kidney cancer, liver cancer, prostate cancer, vulvar cancer, thyroid cancer, liver cancer, and various types of head and neck cancer.
"ErbB-expressing cancer is one that comprises cells that have the ErbB protein on their cell surface so that the anti-ErbB antibody is capable of binding to the cancer.
The term "cytotoxic agent as used herein" refers to a substance that inhibits or prevents the function of cells and / or causes destruction of cells. The term is intended to include radioactive isotopes (e.g., I.<sup>131</sup>, And<sup>125</sup>, Y<sup>90</sup> and Re<sup>186</sup>), chemotherapeutic agents and toxins, such as enzymatically active toxins of bacterial, fungal, plant or animal origin, or fragments thereof.
"A chemotherapeutic agent is a chemical compound useful in the treatment of cancer. Examples of therapeutic agents are alkylating agents such as thiotepa and cyclophosphamide (CYTOXAN<sup>TM</sup>), alkylsulfonates such as busulfan, improsulfan and piposulfan; aziridines such as benzodopa, carboquone, meturedopa, and uredopa; ethyleneimine and methylamelamine, including altretamine, triethylene melamine, triethylene phosphoramide, triethylene thiophosphoramide, and trimethylol melamine; nitrogen mustards such as chlorambucil, chlornaphazine, cholophosphamide, estramustine, ifosfamide, mechlorethamine, mechlorethamine oxide hydrochloride, melphalan, novembichin, fenestrin, prednimustine, trophosphamide, uracil mustard; nitrosoureas such as carmustine, chlorozotocin, fotemystin, lomustine, nimustine, ranimustine; antibiotics such as aclacinomycin, actinomycin, autramycin, azaserin, bleomycin, cactinomycin, calicheamicin, carabicin, kairinophyllin, chromomycin, dactinomycin, daunorubicin, 6-diazo-5-oxo-L-norleucin, epilycin, mycomolorubicin, epicamolicorubicin , olivomycins, peplomycin, potfiromycin, puromycin, streptonigrin, tuPL 217 410 B1, bercidin, ubenimex, zinostatin, zorubicin; antimetabolites such as methotrexate and 5-fluorouracil (5-FU); folic acid analogs such as denopterin, methotrexate, pteropterin, trimetrexate; purine analogs such as fludarabine, 6-mercaptopurine, thiamiprine, thioguanine; pyrimidine analogs such as ancitabine, azacitidine, 6-azauridine, carmofur, cytarabine, dideoxyuridine, doxifluridine, enocitabine, floxuridine, 5-FU; androgens such as calusterone, dromostanolone propionate, epitiostanol, mepitiostane, testolactone; anti-adrenals such as aminoglutethimide, mitotane, trilostane; folic acid replenishers such as frolinic acid; aceglatone; aldophosphamide glycoside; aminolevulinic acid; amsacrine; bestrabucyl; bisanthrene; edatract; defofamine; demecolcin; dizichon; elfornithine; elliptinium acetate; etoglucide; gallium nitrate; hydroxyurea; lentinan; lonidamine; mitoguazone; mitoxantrone; mopidamol; nitracrine; pentostatin; phenamet; pirarubicin; podophyllinic acid; 2-ethylhydrazide; procarbazine; PSK®; razoxane; sizofiran; spirogermanium; tenuazonic acid; triazicvone; 2,2 ', 2' '- trichlorotriethylamine; urethane; vindesine; dacarbazine; mannomustine; mitobronitol; mitolactol; pipobroman; gacytosin; arabinoside ("Ara-C); cyclophosphamide, thiotepa; taxoids, e.g. paclitaxel (TAXOL®, Bristol-Myers Squibb Oncology, Princeton, NJ) and doxetaxel (Taxotere, Rhone-Poulenc Rorer, Antony, France); chlorambucil; gemcitabine; 6-thioguanine; mercaptopurine; methotrexate; platinum analogs such as cisplatin and carboplatin; vinblastine; platinum; etoposide (VP16); ifosfamide; mitocin C; mitoxantrone; vincristine; vinorelbine; reel; nowantron; teniposide; daunomycin; carminomycin; aminopterin; xselode; ibandronate; CPT-11; RFS 2000 topoisomerase inhibitor; difluoromethylornithine (DMFO); retinoic acid; Esperamicin; capecitabine; and pharmaceutically acceptable salts, acids or derivatives of any of the above. Also included in this definition are hormonal agents that regulate or inhibit the action of a hormone on a tumor, such as anti-estrogens, including e.g. tamoxifen, raloxifene, aromatase inhibiting 4 (5) imidazoles, 4-hydroxy tamoxifen, trioxifene, keoxifene, LY117018, onapristone; and anti-androgens such as flutamide and nilutamide; and pharmaceutically acceptable salts, acids or derivatives of any of the above.
"A growth inhibitory agent as used herein refers to a compound or composition that inhibits the growth of a cell, especially a cancer cell overexpressing ErbB, in vitro or in vivo. Thus, a growth inhibitory agent is one that significantly reduces the percentage of cells overexpressing ErbB in the S phase. Examples of growth inhibitory agents are agents that block cell cycle progression (non-S phase) such as agents that induce G1 arrest and M phase arrest. Classical M phase blocking agents include vinca alkaloids (vincristine and vinblastine), TAXOL® and topoisomerase II inhibitors such as doxorubicin, epirubicin, daunorubicin, etoposide and bleomycin. Those measures that stop G1 also carry over to stopping the S phase, e.g. DNA alkylating agents such as tamoxifen, prednisone, dacarbazine, mechlorethamine, cisplatin, methotrexate, 5-fluorouracil, and ara-C. Additional information can be found in The Molecular Basis of Cancer, Mendelsohn and Israel, publishers, Chapter I entitled "Cell cycle regulation, oncogenes, and antineoplastic drugs by Murakami et al (WB Saunders: Philadelphia, 1995), especially page 13. For this purpose. the 4D5 antibody (and its functional equivalents) can also be used.
ErbB receptor tyrosine kinases are important mediators of cell growth, differentiation and survival. The receptor family comprises at least four different members, including the epidermal growth factor receptor (EGFR or ErbB1, HER2 (ErbB2 or p185neu), HER3 (ERbB3), and HER4 (ErbB4 or tyro2).
EGFR, encoded by the ErbB1 gene, has been causally linked to human malignancies. In particular, increased expression of EGFR has been observed in breast, bladder, lung, head, neck and stomach cancer as well as in glioblastomas. Increased expression of the EGFR receptor is often associated with increased production of the EGFR ligand, converting growth factor alpha (IGF-alpha), by cells of the same tumor, causing the receptor to be activated via the autocrine secretory pathway. Baselga and Mendelsohn Pharmac. Ther. 64: 127-154 (1994). Monoclonal antibodies directed against EGFR or its ligands, TGF-alpha and EGF, have been evaluated as therapeutic agents for the treatment of such malignancies. See e.g. Baselga and Mendelsohn, supra; Masui et al., Cancer Research 44: 1002-1007 (1984); and Wu et al., J.Clin.Invest. 95: 1897-1905 (1995).
A second member of the ErbB family, p185neu, was initially identified as the product of the transforming gene from neuroblastoma of chemically treated rats. The activated form of the neu proto-oncogene results from a point mutation (valine to glutamic acid) in the codo10 integral region
Produced protein. Amplification of the human neu homologue is observed in breast and ovarian cancers and correlates with poor prognosis (Slamon et al., Science, 235: 177-182 (1987); Slamon et al., Science 244: 707-712 (1989); and U.S. Patent No. US 4,968,603). To date, no point mutation analogous to that of the neu proto-oncogene has been described for human neoplasms. HER2 overexpression (often but heterogeneously due to gene duplication) has also been observed in other cancers, including cancers of the stomach, endometrium, salivary gland, lung, kidney, colon, thyroid, pancreas, and bladder.
Antibodies directed against rat p185 neu and human HER2 protein products have been described. Drebin and colleagues raised antibodies against the rat neu gene product, p185neu (see, e.g., Drebin et al., Cell 41: 695-706 (1985); Myers et al., Meth. Enzym. 198: 277290 (1991); and WO94 / 22478) . Drebin et al. (Oncogene 2: 273-277 (1988)) report that mixtures of antibodies reactive with two different regions of p185neu cause a synergistic anti-tumor effect on neu-transformed NIH-3T3 cells implanted into nude mice (see also US Patent No. 5,824 311).
Hudziak et al. (Mol. Cell. Biol. 9 (3): 1165-1172 (1989)) describes the generation of a panel of anti-HER2 antibodies that have been characterized using the human breast cancer cell line SKBR3. Relative cell proliferation of SKBR3 cells after antibody exposure was determined by crystal violet staining of the monolayers after 72 hours. Using this assay, maximum inhibition was achieved with the antibody called 4D5, which inhibited cell proliferation by 56%. The other antibodies in the panel in this trial reduced cell proliferation to a lesser extent. The 4D5 antibody has additionally been found to sensitize breast cancer cell lines overexpressing HER2 to the cytotoxic effects of TNF-alpha (see also US Patent 5,677,171). The anti-HER2 antibodies discussed in Hudziak et al. Are further characterized (Fendly et al., Cancer Research 50: 1550-1558 (1990)); Kotts et al., In Vitro 26 (3): 59A (1990); Sarup et al., Growth Regulation 1: 72-82 (1991); Shepard et al., J. Clin. Immunol. 11 (3): 117-127 (1991); Kumar et al., Mol. Cell. Biol. 11 (2): 979-986 (1991); Lewis et al., Cancer Immunol. Immunother. 37: 255-263 (1993); Pietras et al. Oncogene 9: 1829-1838 (1994); Vitetta et al., Cancer Research 54: 5301-5309 (1994); Sliwkowski et al., J.Biol.Chem. 269 (20): 14661-14665 (1994); Scott et al., J. Biol. Chem. 266: 14300-5 (1991); D'souza et al., Proc. Natl. Acad. Sci. 91: 7202-7206 (1994); Lewis et al., Cancer Research 56: 1457-1465 (1996); and Schaefer et al., Oncogene 15: 1385-1394 (1997)).
Recombinant humanized IgG1 version of the murine anti-HER2 antibody 4D5 (rhuMAb HER2 or Herceptin®; commercially available from Genentech, Inc., South San Francisco) is clinically active in patients with HER2 overexpressing metastatic breast cancer who have received extensive anti-cancer therapy (Balsega et al. J. Clin. Oncol. 14: 737-744 (1996)). Herceptin® received a market approval from the Food and Drug Administration on September 25, 1998 for the treatment of patients with metastatic breast cancer whose tumors overexpress the HER2 protein. The current therapy protocol uses IHC to determine HER2 protein overexpression.
Other anti-HER2 antibodies with different properties have been described (Tagliabue et al., Int. J. Cancer 47: 933-937 (1991); McKenzie et al., Oncogene 4: 543-548 (1989); Maier et al., Cancer Res. 51: 5361-5369 (1991); Bacus et al., Molecular Carcinogenesis 3: 350-362 (1990); Stancovski et al. (Proc. Natl. Acad. Sci USA 88: 8691-8695 (1991); Bacus et al., Cancer Research 52: 2580-2589 (1992); Xu et al., Int. J. Cancer 53: 401- 408 (1993); PCI Publication No. WO 94 / -136; Kasprzyk et al., Cancer Research 52: 2771-2776 (1992); Hancock et al., Cancer Res. 51: 4575-4580 (1991); Shawver et al., Cancer Res. 54: 1367-1373 (1994); Arteaga et al., Cancer Res. 54: 3758-3765 (1994); Harwerth et al., J. Biol. Chem. 267: 15160-15167 (1992); U.S. Patent No. 5,783,186; Klapper et al. Oncogene 14: 2099-2109 (1997); and PCT Publication No. WO98 / 77797).
Homology screening resulted in obtaining members of the ErbB receptor family: HER3 (US Patent Nos. 5,183,884 and 5,480,968; Kraus et al., Proc. Natl. Acad. Sci. USA 86: 9193-9197 (1989)) and HER4 (European Patent Application No. EP 599 274; Plowman et al., Proc. Natl. Acad. Sci. USA, 90: 1746-1759 (1993) 1 and Plowman et al., Nature 366: 473-475 (1993)). Both receptors show increased expression in at least some breast cancer cell lines.
ErbB receptors are generally found in various combinations in cells and heterodimerization is believed to increase the diversity of cellular responses to various ErbB ligands (Earp et al., Breast Cancer Research and Treatment 35: 115-132 (1995)). EGFR is bound by six different ligands: epidermal growth factor (EGF), transforming growth factor alpha
PL 217 410 B1 (TGF-alpha), amphiregulin, heparin binding epidermal growth factor (HB-EGF), betacellulin and epiregulin (Groenen et al. Growth Factors 11: 235-257 (1994)). The family of heregulin proteins resulting from alternative single gene splicing are ligands for HER3 and HER4. The heregulin family includes the alpha, beta, and gamma heregulins (Holmes et al., Science, 256: 1205-1210 (1992); US Patent No. 5,641,8691 and Schaefer et al., Oncogene 15: 1385-1394 (1997)); neu differentiation factors (NDF); glial growth factors (GGF); Acetylcholine receptor (ARIA) 1 inducing activity and factors derived from sensory and motor neurons (SMDF) (for review, see Groenen et al., Growth Factors 11: 235-257 (1994); Lemke, G., Molec. & Cell. Neurosci. 7: 247-262 (1996) and Lee et al. Pharm. Rev. 47: 51-85 (1995)). Two additional ErbB ligands have recently been identified: neuregulin-2 (NFG-2), which has been reported to bind either HER3 or HER4 (Chang et al., Nature: 387 509-512 (1997); and Carraway et al., Nature 387: 512- 516 (1997)) and neuregulin-3 which binds HER4 (Zhang et al. (Proc. Natl. Acad. Sci. USA) 94 (18): 9562-7 (1997)). HB-EGF, betacellulin and epiregulin also bind HER4.
Although EGF and TGF-alpha do not bind HER2, EGF stimulates EGFR and HER2 to form a heterodimer that activates EGFR and causes HER2 transphosphorylation in the heterodimer. Dimerization and / or transphosphorylation appears to activate HER2 tyrosine kinase (Earp et al., Supra). Similarly, when HER3 is co-expressed with HER2, an active signaling complex is formed and anti-HER2 antibodies are capable of disrupting this complex (Sliwkowski et al., J. Biol. Chem., 269 (20): 14661-14665 (1994)). In addition, the affinity of HER3 for heregulin (HRG) is increased to a higher affinity state when co-expressed with HER2. See also Levi et al. Journal of Neuroscience 15: 1329-1340 (1995); Morrissey et al., Proc. Natl. Acad Sci USA 92: 1431-1435 (1995); and Lewis et al., Cancer Res, 56: 1457-1465 (1996) for the HER2HER3 protein complex. HER4, like HER3, forms an active signaling complex with HER2 (Carraway and Cantley, Cell 78: 5-8 (1994)).
Gene duplication detection
Any gene duplication detection technique can be used in the present invention. (See Boxer, J. Ciin. Pathol. 53: 19-21 (2000)). These techniques include in situ hybridization (Stoler, Clin. Lab. Med. 12: 215-36 (1990)), using radioisotope or fluorescently labeled probes; polymerase chain reaction (PCR); Southern blotting and other quantification techniques for specific genes. Preferably, the probes or primers selected for assessing gene amplification are highly specific to avoid the detection of closely related homologous genes.
The word "tag, when used herein, refers to a compound or composition that is conjugated or fused directly or indirectly to a reagent, such as a nucleic acid probe or antibody, and facilitates detection of the reagent with which it is conjugated or linked. by merger. The label may be itself detectable (e.g. radioisotope labels or fluorescent labels) or, in the case of an enzyme label, can catalyze a chemical alteration of the substrate compound or composition that is detectable. A hapten or epitope that is immunospecifically bound by the antibody may also serve as a label.
The term "fluorescently labeled nucleic acid probe" refers to a probe comprising (I) a nucleic acid having a sequence that renders it capable of hybridizing to a target nucleic acid sequence and (2) a fluorescent label. Preferably, such hybridization is specific, that is to say, it can take place under very stringent conditions.
Prepare a sample
Any tissue sample from the test subject can be used. Examples of tissue samples that can be used include, but are not limited to, the breast, prostate, ovary, colon, lung, endometrium, stomach, salivary gland, or pancreas. A tissue sample can be obtained by a variety of procedures including, but not limited to, surgical excision, aspiration, or biopsy. The tissue may be fresh or frozen. In one embodiment, the tissue sample is fixed and embedded in paraffin or the like.
The tissue sample may be fixed (i.e., preserved) using conventional methodology (see, e.g., Manual of Histological Method of the Armed Forces Institute of Pathology, 3rd edition by Lee G. Luna, HT (ACP) publisher, The Blakston Division McGraw- Hill Book Company: New York; (1960); The Armed Forces Institute of Pathology Advanced Laboratory Methods in Histology and Pathology (1994) by Ulrek V. Mikel, publisher, Armed Forces Institute of Pathology, American Registry of Pathology, Washington, DC). One skilled in the art will make the choice of fixer, which choice is determined by the purpose for which the tissue is to be stained histologically or otherwise analyzed.
PL 217 410 B1
One skilled in the art will also appreciate that the length of the fixation depends on the size of the tissue sample and the fixer used. For example, neutral buffered formalin, Bouin, or paraformaldehyde can be used to fix the tissue sample.
Generally, a tissue sample is fixed first and then dehydrated by an increasing series of alcohols, soaked, and embedded in paraffin or other sectioning media so that a section of the tissue sample can be made. Alternatively, a tissue section can be made and the obtained sections fixed. For example, a tissue sample can be embedded and processed in paraffin using conventional methodology. Examples of paraffin that can be used include, but are not limited to, Paraplast, Broloid, and Tissuemay. After embedding the tissue sample, sections may be made using a microtome or the like. For example, in terms of this procedure, sections may have a thickness ranging from about three microns to about five microns. After the sections are made, the sections can be joined to the slides by several standard methods. Examples of slide adhesives include, but are not limited to, silane, gelatin, poly-L-lysine, and the like. For example, paraffin-embedded sections can be joined to positively charged, poly-L-lysine coated glasses.
If paraffin has been used as the embedding material, the tissue sections are generally deparaffinized and rehydrated. Tissue sections can be dewaxed using several conventional standard methodologies. For example, xylenes and gradually descending series of alcohols can be used. Alternatively, commercially available inorganic dewaxing agents such as Hemo-De7 (CMS, Houston, Texas) can be used.
Fluorescence in situ hybridization (FISH)
In situ hybridization is generally performed on cells or tissue sections fixed on glass slides. In situ hybridization can be performed using several conventional methodologies (see, e.g., Litch et al., In Situ Hybridization: A Practical Guide, Oxford BIOS Scientific Publishers, Microscopy Handbooks, Vol. 27 (1994)). In one in situ procedure, fluorescent dyes (such as fluorescein isothiocyanate (FITC) that fluoresces green when excited by an argon ion laser) are used to label a probe with a nucleic acid sequence that is complementary to the target nucleotide sequence in the cell. Any cell containing the target nucleotide sequence will bind to the labeled probe, generating a fluorescent signal when exposed to a light source of a wavelength appropriate for excitation of the specific fluorochrome used. "A target nucleotide sequence is a sequence specific for an overexpressed tumor antigen, such as ErbB. FISH analysis can be used in conjunction with other assays, including, without limitation, morphological staining (a series of sections or the same section; see PCT Publication No. WO 00/20641, specifically incorporated herein by reference).
Various degrees of stringency of hybridization can be used. As hybridization conditions become more stringent, a greater degree of complementarity between probe and target is required to create and maintain a stable duplex. The severity is increased by increasing the temperature, lowering the salt concentration, or increasing the formamide concentration. Adding dextran sulfate or increasing its concentration can also increase the effective concentration of the labeled probe to increase the hybridization rate and the final signal intensity. Following hybridization, slides are washed in a solution generally containing reagents similar to those found in the hybridization solution, the washing time varying from minutes to hours depending on the stringency required. Longer or more severe washing usually lowers non-specific background but runs the risk of reducing overall sensitivity.
The probes used in FISH analysis can be either RNA or DNA oligonucleotides or polynucleotides and can include not only naturally occurring nucleotides but analogs thereof such as dCTP digoxigenin, dcTP biotin 7-azaguanosine, azaguanosine, inosine or uridine. Other useful probes include peptide probes and analogs thereof, branched gene DNA, peptide mimics, peptide nucleic acid (PNA), and / or antibodies.
Probes should have sufficient complementarity with the target nucleic acid sequence of interest such that stable and specific binding occurs between the target nucleic acid sequence and the probe. The degree of homology required for stable hybridization varies with the stringency of the hybridization environment and / or washing environment. Preferably, fully homologous probes are used in the present invention, but those skilled in the art will readily appreciate that probes showing less but sufficient homology can be used in the present invention (see, e.g., Sambrook, J. et al., Molecular Cloning A Laboratory Manual, Cold). Spring Harbor Press, (198-9)).
One skilled in the art will know that the choice of probe depends on the characteristics of the target gene under study. Examples of amplification include, but are not limited to, her2 / neu in breast and ovarian cancer, n-myc in neuroblastoma, c-myc in small cell lung cancer. For example, to assess her2 / neu amplification, a probe covering the 140 kb region on the long arm of chromosome 17 containing the her2 / neu gene (17q 11.2-17q12) can be used. A probe for satellite sequences in the centromeric region of chromosome 17 (D1721) can be used to evaluate chromosome 17 aneusomy as a source or reason for her2 / neu duplication. For example, these probes in a cocktail version may be obtained from Vysis, Inc. where each probe is directly labeled with easily distinguishable fluorophores such as SPECTRUM ORANGE7 and SPECTRUM GREEN7.
Probes may also be constructed and selected in several ways including, but not limited to, mapping by in situ hybridization, panels of somatic cell hybrids, or spotted chromosome prints; chromosomal binding analyzes; or clone or isolate from libraries of sorted chromosomes from human cell lines or hybrids of somatic cells with human chromosomes, irradiation of somatic cell hybrids, micro-preparation of the chromosomal region, or from yeast artificial chromosomes (YAC) identified by PCR primers specific for a unique chromosomal locus, or other appropriate methods like a clone of the adjacent YAC. The probes may be genomic DNA, cDNA or RNA cloned into a plasmid, phage, cosmid, YAC, bacterial artificial chromosome (BAC), viral vector, or any other suitable vector. Probes can be cloned or chemically synthesized by conventional methods. For cloning, the isolated probe nucleic acid fragments are typically inserted into a vector such as lambda phage, pBR322, M13, or vectors containing the SP6 or T7 promoter, and cloned as a library in a bacterial host (see, e.g., Sambrook, supra).
The probes are preferably labeled with a fluorophore. Examples of fluorophores include, but are not limited to, rare earth chelates (europium chelates), Texas Red, rhodamine, fluorescein, dansyl, Lissamine, umbelliferon, phycocriterin, phycocyanin, or commercially available fluorophores such as SPECTRUM ORANGE7 and SPECTRUM GREEN7 and / or derivatives of any one or more of the above. The multiple probes used in the assay may be labeled with more than one discernible fluorescent or pigmented color. These color differences provide a means to identify the hybridization positions of specific probes. In addition, probes that are not spatially separated can be identified by a different brightness of the color or pigment resulting from mixing two or different colors (e.g., bright red + green = yellow), a pigment (e.g. blue + yellow = green) or by applying a set of filters that only let through one color at a time.
The probes can be labeled directly or indirectly with a fluorophore using conventional methodology. Additional probes and colors can be added to refine and extend this general procedure to cover more genetic abnormalities or to serve as internal controls. For example, the her2 / heu gene lies on chromosome 17, and a chromosome 17-specific satellite sequence (DlZl) probe (Vysis, Inc) can be used as an internal control to prove diploidy in benign cell regions and / or to determine the presence or absence of chromosome 17 aneusomy in areas of duplication her2 / neu.
After FISH development, slides can be analyzed by standard fluorescence microscopy techniques (see, e.g., Ploem and Tanke, Introduction to Fluorescence Microscopy, Oxford University Press: New York (1987)). Briefly, each slide is viewed using a microscope fitted with appropriate excitation, dichrome, and barrier filters. Filters are selected on the basis of the excitation and emission spectra of the fluorochromes used. Photographs of the slides can be taken at the length of the exposure time of the film depending on the fluorescent marker used, the signal intensity and the filter selected. For FISH analysis, the physical locations of the cells of interest as determined by the morphological analysis are recalled and visually conformed as suitable regions for quantification of FISH.
To correlate IHC with FISH, a computer-guided, automated step that stores the coordinate position can be used. It can be used to assess the same area by two different analytical techniques. For example, color images of morphologically stained areas can be captured and saved using a cooled CCD camera coupled to a computer. The same cross-section can then be taken into a FISH routine to store the position
The referenced and labeled regions were evaluated for the presence of nuclear fluorescent signals. A similar procedure is considered for IHC followed by FISH.
Typically hundreds of cells in a tissue sample are analyzed and the quantification of a specific target nucleic acid sequence is determined as fluorescent spots that are counted against the number of cells. The deviation from the norm in the number of spots in a cell (e.g. (such as probing for the her2 / neu gene in a normal cell will produce two copies, in abnormal cells more than two) is indicative of the greater likelihood of benefit from therapy with a tumor antigen-specific antibody, e.g., therapy with an ErbB antagonist. As exemplified below, amplification of the her2 gene provides a much more effective indication of the likelihood that anti-HER2 antibody therapy will be effective.
Pharmaceutical preparations
The used therapeutic preparations of antagonists, e.g. antibodies, are prepared for storage by mixing the antibody having the desired degree of purity with optional pharmaceutically acceptable carriers, excipients or stabilizers (Remington's Pharmaceutical Sciences 17th edition, publisher Osol, A.), in the form of lyophilized preparations or solutions. aquatic. Acceptable carriers, excipients, or stabilizers are nontoxic to recipients at the dosages and concentrations employed, and include buffers such as phosphate, citrate, and other organic acids; antioxidants including ascorbic acid and methionine; preservatives (such as octadecyldimethylbenzylammonium chloride; hexamethonium chloride; benzalkonium chloride, benzethonium chloride; phenol, butyl or benzyl alcohol; alkyl parabens such as methyl or propyl paraben; catechol; resercinol; cyclohexanol; 3-pentanol; and m-cresol); low molecular weight polypeptides (less than about 10 residues); proteins, such as serum albumin, gelatin, or immunoglobulins; hydrophilic polymers such as polyvinylpyrrolidone; amino acids such as glycine, glutamine, asparagine, histidine, arginine, or lysine; monosaccharides, di-sugars, and other carbohydrates including glucose, mannose, or dextrins; chelating agents such as EDTA; sugars such as sucrose, mannitol, trehalose or sorbitol; salt-forming counterions such as sodium; metal complexes (e.g. Zn-protein complexes); and / or non-ionic surfactants such as TWEEN<sup>TM</sup> PLURONICS<sup>TM</sup> or polyethylene glycol (PEG). Preferred freeze-dried preparations of anti-ErbB antibodies are described in WO97 / 04801, which is specifically incorporated herein by reference.
The formulation may also contain more than one active compound as necessary for the particular indication being treated, preferably those exhibiting complementary activities that do not adversely affect each other. For example, it may be desirable to additionally provide antibodies that bind EGFR, ErbB2, ErbB3, ErbB4, vascular endothelial growth factor, or an antibody that binds to a different epitope on the target ErbB in one preparation. Alternatively or additionally, the composition may contain a cytotoxic agent, a chemotherapeutic agent, a cytokine, a growth inhibitory agent, and / or a heart protective agent. Such molecules are suitably present in the composition in amounts that are effective for the purpose intended.
Active ingredients may also be entrapped in microcapsules prepared e.g. by coacervation or interfacial polymerization techniques e.g. ) or in macroemulsions. Such techniques are described in Remington's Pharmaceutical Sciences, 17th Edition, edited by Osol, A.
Formulations used for in vivo administration are preferably, and in the case of humans must be, sterile. This is readily accomplished by filtration through sterile filter membranes.
Sustained release formulations can be made. Suitable examples of sustained-release preparations include semipermeable matrices of solid hydrophobic polymers containing the antibody, which matrices are in the form of shaped articles, e.g. films, or microcapsules. Examples of sustained release matrices include polyesters, hydrogels (e.g. poly (2-hydroxyethylmethacrylate) or poly (vinyl) alcohol), polylactides (US Patent No. 3,773,919), copolymers of L-glutamic acid and γ-ethyl-L-glutamate, non-degradable ethylene vinyl acetate, degradable copolymers lactic acid-glycolic acid such as
LUPRON DEPOT<sup>TM</sup> (injectable microspheres composed of a lactic acid-glycolic acid copolymer and leuprolide acetate) and poly-D - (-) - 3-hydroxybutyric acid. Although polymers such as ethylene vinyl acetate and lactic acid-glycolic acid allow release of molecules for over 100 days, certain hydrogels release proteins for a shorter period of time. When the antibodies are enclosed in capsules
They remain in the body for a long time, may denature or clump together upon exposure to moisture at 37 ° C, resulting in a loss of biological activity and possible changes in immunogenicity. Rational strategies can be devised depending on the mechanism used. For example, if the clumping mechanism is found to be the formation of SS bonds through internal thiodisulfide exchange, stabilization can be achieved by modifying sulfhydryl residues, lyophilizing from acidic solutions, controlling moisture content, using appropriate additives, and developing specific compositions of polymer matrices.
Treatment with an anti-ErbB antagonist
It is contemplated that anti-ErB antibodies or other antagonists can be used to treat various conditions characterized by overexpression and / or activation of the ErbB receptor in patients who have detected a duplicate erbB gene. Exemplary conditions or conditions include benign or malignant neoplasms (e.g. cancers of the urinary system, liver, kidney, bladder, breast, stomach, ovary, colorectal, prostate, pancreas, lung, vulva, thyroid gland, liver cells); sarcomas, gliomas; and various cancers of the head and neck); leukemias and malignant lymphoid diseases; other conditions such as neuronal, glial, stellate, hypothalamic, glandular, macrophage, epithelial, stromal, blastocellic, inflammatory, angiogenic and immune disorders.
Antibodies, chemotherapeutic agents and all other active agents are administered to a human patient according to known methods such as intravenous bolus injection or by continuous infusion over a period of time, by the intramuscular, intraperitoneal, intrathecal, subcutaneous, intraarticular, intrasynovial, intratracheal, oral, topical or inhalation. Intravenous or subcutaneous administration of the antibody is preferred.
In one embodiment, the treatment comprises the combined administration of an anti-ErbB antibody and a chemotherapeutic agent, e.g., a taxoid. Cocktails of various chemotherapeutic agents may be administered. Combined administration involves co-administration, using separate formulations or a single pharmaceutical formulation, and sequential administration in each order, preferably there is a period of time when both (or all) active agents simultaneously exert their biological activity. The formulation and dosing program for such chemotherapeutic agents may be used according to the manufacturer's instructions or as determined empirically by one of skill in the art. A formulation and dosing program for such chemotherapy are also described in the Chemotherapy Service, edited by MC Perry, Williams & Wilkins, Baltimore, MD (1992). The chemotherapeutic agent may precede, or follow administration of the antibody, or may be administered concurrently therewith. The antibody may be combined with an anti-estrogen compound such as tamoxifen or an anti-progesterone compound such as onapristone (see EP 616 812) at dosages known for such molecules.
In addition to the above therapeutic programs, the patient may undergo surgical removal of cancer cells (tumor resection) and / or radiation therapy.
To prevent or treat a disease, a suitable dosage of an antagonist, e.g., an antibody, will depend on the type of disease being treated, as defined above, the severity and course of the disease, whether the antibody is being administered for preventive or therapeutic purposes, prior therapy, the patient's clinical history, and response to the antibody. , and the discretion of the attending physician. The antibody is suitably administered to the patient at once or over a series of treatments.
Depending on the nature and severity of the disease, about 1 µg / kg to 15 µg / kg (e.g. 0.1-20 mg / kg) of the antibody is an initial optional dose to be administered to a patient, whether e.g. in one or more separate administrations. or in continuous infusion. A typical daily dosage might be from about 1-100 pg / kg or more, depending on the factors mentioned above. For repeated administrations over several days or longer, depending on the condition, treatment is extended until the desired suppression of disease symptoms is achieved. However, other dosing programs can be useful. The progress of this therapy is readily monitored by conventional techniques and trials.
Pharmaceutical packaging; manufactured goods
The description of the present invention discloses an article of manufacture containing materials useful in the treatment of the conditions described above. The article of manufacture includes a container, possibly with a label, and a cartridge. Suitable containers include, for example, bottles, vials, syringes, etc. The containers can be formed from a variety of materials such as glass or plastic. The container holds a composition that is effective in treating the condition and preferably has a sterile access gate (e.g. the container may be an intravenous bag or a vial having a stopper that can be pierced by a hypodermic injection needle). At least one active agent in the composition is a therapeutic antibody
An anti-tumor antigen or an ErbB antagonist, e.g., an anti-ErbB antibody. The label on or attached to the container indicates that the composition is used to treat the condition selected. The article of manufacture may further comprise a second container containing a pharmaceutically acceptable buffer such as phosphate buffered saline, Ringer's solution, and dextrose solution. The latter buffer may be used to reconstitute the active agent, if provided as a lyophilisate or dry powder, or to dilute a concentrated formulation of the active agent. It may additionally include other materials desirable from a market or user standpoint, including other buffers, diluents, filters, needles, and syringes.
In addition, the article of manufacture includes a cartridge or cartridges with instructions for use for a patient in whom duplication of the erbB gene has been detected, e.g. in a FISH test. Such patients can be subjects who would be excluded from treatment with an ErbB antagonist in IHC, e.g., subjects who achieved a score of 0 or 1+ with an anti-HER2 antibody.
Material deposit
The following hybridoma cell lines have been deposited with the American Type Culture Collection, 12301 Parklawn Drive, Rockville, MD, USA (ATCC):
<td>Mark</td><td>AICC No.</td><td>Date of submission</td>
<td>antibodies</td><td></td><td></td>
<td>7C2</td><td>AICC HB-12215</td><td>October 17, 1996</td>
<td>7F3</td><td>AICC HB-12216</td><td>October 17, 1996</td>
<td>4D5</td><td>AICC CRL 10463</td><td>May 24, 1990</td>
Additional details of the invention are illustrated by the following non-limiting examples.
Example 1: Concordance between a clinical study (CTA) and fluorescence in situ hybridization (FISH) in axial Herceptin® experiments
HER2 overexpression of 2+ or 3+ levels by immunohistochemistry (IHC) was required when enrolling in pivotal experiments with metastatic breast cancer using Hercept and nu®. The clinical study (CTA) consists of two separate IHC tests performed with either the 4D5 monoclonal antibody (after protease digestion of the formalin-fixed sample) or CB11 (after heat treatment of the formalin-fixed sample). Subjects were eligible if the score on each trial was 2+ or 3+. If both trials were performed, the final score was higher than the two.
The agreement between the CTA and the other IHC, HercepIest (HT), is 79%. This was the basis for FDA approval of HI as an aid in selecting patients for Herceptin therapy.
This example describes a similar compatibility study using the clinical material screened for the Herceptin® Axial experiments that compares CTA to the her2 / neu gene amplification measured in the FISH PathVysion assay. In these pivotal experiments, 5,998 subjects were screened for HER2 expression; 1,915 (32%) were positive according to the CTA and 4,083 (68%) were negative. A blank of 623 specimens (1: 1 positive: negative ratio), 317 CTA + and 306 CTA- were selected for this analysis. The specimens had not been freshly cut from the blocks. They were stored for 2-4 years as 4-6 µm sections on microscope slides. Each section was tested for amplification of her2 / neu using the protocol listed in the PathVysion assay package insert. The amplification was defined as a signal factor greater than or equal to 2. The results are shown in Table 1.
TABLE 1 FISH / CTA Compatibility
<td rowspan="2"></td><td colspan="3">CTA</td><td rowspan="2"> 3+</td><td rowspan="2"></td>
<td> 0</td><td> 1+</td><td> 2+</td>
<td>FISH -</td><td> 207</td><td> 28</td><td> 67</td><td> 21</td><td></td>
<td> +</td><td> 7</td><td> 2</td><td> 21</td><td> 176</td><td></td>
<td></td><td> 4%</td><td> 7%</td><td> 24%</td><td> 89%</td><td> 529</td>
FISH + = HER2: CEP17 signal ratio> 2 Compliance = 82% (79-85%)
For all 623 tested specimens, the FISH signal result was obtained in 529. The trial failure occurred in 19.9% of the CTA- and 10.4% CTA + samples. The duplication in groups 0, 1+, 2, and 3+ was 4.2%, 6.7%, 23.9%, and 89.3%, respectively. The sample agreement was 81.3% similar to the agreement
PL 217 410 B1
CTA / HT of 79%. Single copy overexpression was 31%, mostly in the 2+ group. Duplication was rarely reported (4.6%) in the CTA- group. The reason for the higher trial failure rate in the CTA- group may be factors unrelated to the trial, such as tissue fixation. They can also cause a false negative for the IHC.
These data were closely interpreted, suggesting that the her2 / neu duplicate state may have an unexpectedly higher predictive value in identifying patients who are more likely to benefit from Herceptin® treatment compared to HercepTest. The observation that only 24% of 2+ patients are FISH + suggests that this subgroup may have a less predictable treatment outcome when selected by IHC alone. Identifying FISH + patients in subgroups 1+ and 0 can identify subjects who, although not meeting IHC criteria for Herceptin® treatment, are likely to benefit from Herceptin® treatment. A direct analysis of the benefit of Herceptin® treatment based on the FISH score versus the IHC score is presented in Example 2.
Example 2: FISH Study / Clinical Outcome
This example combines the results from three Herceptin® experiments with the FISH condition. In this study, 805 subjects were randomly selected from all three experiments. With nothing, HBa 167 had no slides. Another 78 (9.7%) attempts were unsuccessful. Thus, formalin-fixed sections stored 2.5-4.5 years from 540 individuals provided a sample collection for this study. There was no imbalance in the demographic or prognostic indicators in these adjustments. Results are reported for different treatment groups.
Correlation of FISH status with response was assessed for patients who received Herceptin® as a second or third line of therapy. These data are provided for individuals 2+ and 3+ (according to CIA) in Table 2.
Table 2
Single-agent FISH / response Herceptin®, 2nd or 3rd line of therapy, subgroup 3 + / 3 +
<td></td><td>FISH +</td><td>FISH-</td>
<td>Reply</td><td> 21</td><td> 0</td>
<td>No answer</td><td> 84</td><td> 37</td>
<td>Factor answers</td><td> 20%</td><td> 0%</td>
(12,5-27,5%) (0,7%)
N = 142
The response rate of 20% for FISH + subjects unexpectedly exceeds the 15% response rate of patients 2+ and 3+ in this study, and the 14% response rate observed in CIA selected patients with immunohistochemistry scores of 2+ or 3+ during the pivotal experiments. Thus, while FISH correlates well with IHC approximately to the same extent as the other IHC assay, Herceplest, as shown in Example 1, is surprisingly better at identifying patients who are more likely to benefit from Herceptin® therapy.
When these data were broken down into components 3+ and 2+, the same response rate of 20% of the FISH + subjects was seen (Tables 3 and 4).
Table 3
FISH / response for a single Herceptin® agent, 2nd or 3rd line of therapy, subgroup 3+
<td></td><td>FISH +</td><td>FISH-</td>
<td>Reply</td><td> 18</td><td> 0</td>
<td>No answer</td><td> 72</td><td> 17</td>
<td>Factor answers</td><td> 20%</td><td> 0%</td>
(12-28%) (0-14%)
N = 107
PL 217 410 B1
Table 4
FISH / response for a single Herceptin® agent, 2nd or 3rd line of therapy, subgroup 2+
<td></td><td>FISH +</td><td>FISH-</td>
<td>Reply</td><td> 3</td><td> 0</td>
<td>No answer</td><td> 12</td><td> 20</td>
<td>Factor answers</td><td> 20%</td><td> 0%</td>
(1-40%) (0-14%)
N = 35
In the 3+ subgroup, the FISH + response rate (20%) was very strict but still exceeded the 17% response rate in 3+ individuals. The 2+ subgroup showed a much greater difference with only a 9% response rate versus the 20% by FISH + selection. These data show that the FISH + state (amplification of the her2 gene) greatly increases the likelihood of a response to Herceptin®.
Data were also evaluated in terms of patients' response to Herceptin® as first-line therapy (Table 5).
Table 5
FISH / response for Herceptin® single agent, 1st line of therapy, combined 2 + / 3 +
<td></td><td>FISH +</td><td>FISH-</td>
<td>Reply</td><td> 17</td><td> 1</td>
<td>No answer</td><td> 24</td><td> 20</td>
<td>Factor answers</td><td> 41%</td><td> 20%</td>
(26-56%) (0-14%)
N = 62
The response rate of the FISH + subjects was significantly greater than the response rate of 27% of the 3+, 2+ subjects.
The surprising increase in the likelihood of a favorable response from FISH analysis extended to responses to chemotherapy plus Herceptin® as shown in Table 6. FISH + subjects showed a significantly greater response to chemotherapy and Herceptin® (54%) than FISH (41%). Tables 7-9 provide more extensive data, including different chemotherapeutic agents (adrianomycin and cyclophosphamide, AC; and Paditaxol, P) and different endpoints (response rate, time-to-progression, and survival) for Herceptin® in combination with chemotherapy.
Table 6
FISH / Response to chemotherapy + / - Herceptin®, 1st line of therapy; connected 2 + / 3 +
<td></td><td>C herself</td><td>C + H</td>
<td>FISH-</td><td> 39%</td><td> 41%</td>
<td></td><td> (26-52%)</td><td> (27-55%)</td>
<td>FISH +</td><td> 27%</td><td> 54%</td>
<td></td><td> (19-35%)</td><td> (45-63%)</td>
N = 336
Table 7
Response rate of newly identified populations
<td colspan="2"></td><td>H + Ac (n = 143)</td><td>AC (n = 138)</td><td>H + P (n = 92)</td><td>P. (n = 96)</td><td>H + CT (N-235)</td><td>CT (n = 234)</td>
<td> 2 + /3 +</td><td> 469</td><td> 56*</td><td> 42</td><td> 41*</td><td> 17</td><td> 50*</td><td> 32</td>
<td> 3 +</td><td> 349</td><td> 60*</td><td> 42</td><td> 49*</td><td> 17</td><td> 56*</td><td> 31</td>
<td>FISH +</td><td> 240</td><td> 58*</td><td> 40</td><td> 49*</td><td> 14</td><td> 54*</td><td> 27</td>
p <0.05
PL 217 410 B1
Table 8
Time to progress (months) of newly identified populations
<td colspan="2"></td><td>H + Ac (n = 143)</td><td>AC (n = 138)</td><td>H + P (n = 92)</td><td>P. (n = 96)</td><td>H + CI (N-235)</td><td>CT (n = 234)</td>
<td> 2 + /3 +</td><td> 469</td><td> 7,8*</td><td> 6,1</td><td> 6,9*</td><td> 2,7</td><td> 7,4*</td><td> 4,6</td>
<td> 3 +</td><td> 349</td><td> 8,1</td><td> 6,0</td><td> 7,1*</td><td> 3,0</td><td> 7,8*</td><td> 4,6</td>
<td>FISH +</td><td> 240</td><td> 7,8*</td><td> 6,2</td><td> 7,0*</td><td> 3,2</td><td> 7,3*</td><td> 4,6</td>
* p <0.05
Table 9
Survival (months) of newly identified populations
<td colspan="2"></td><td>H + Ac (n = 143)</td><td>AC (n = 138)</td><td>H + P (n = 92)</td><td>P. (n = 96)</td><td>H + CT (N-235)</td><td>CT (n = 234)</td>
<td> 2 + /3 +</td><td> 469</td><td> 27</td><td> 21</td><td> 22</td><td> 18</td><td> 25*</td><td> 20</td>
<td> 3 +</td><td> 349</td><td> 31*</td><td> 21</td><td> 25</td><td> 18</td><td> 29*</td><td> 20</td>
<td>FISH +</td><td> 240</td><td> 29*</td><td> 20</td><td> 25*</td><td> 14</td><td> 27*</td><td> 18</td>
* p <0.05
These data uniformly confirm that FISH + analysis, while closely correlating with IHC, is a much more accurate indicator of the likelihood of success with Herceptin® treatment. Consistent with the results from the tables, FISH + selection has approximately 1/3 (30%) higher response rates than IHC selection for groups 2 + / 3 +. By focusing on patients 2+, the FISH status provides a much more effective tool for selecting patients. FISH conditions also identify patients who, due to status 0 or 1+ as determined by IHC, would otherwise be excluded from treatment.
These observations have broad implications for anti-cancer therapies based on the ErbB receptor antagonist and for cancer antigen therapies in general. Thus, erbB antagonists, e.g. anti-erbB receptor antibodies such as Herceptin®, may be more likely to be effective when administered to patients who are positive for amplification of the erbB gene, e.g. by the FISH test. Based on these data, this is certainly the case with Herceptin®.
The present invention is not limited to the specific embodiments described herein. Indeed, various modifications of the invention in addition to those described herein will become apparent to those skilled in the art from the foregoing description and accompanying figures. Such modifications are intended to fall within the scope of the appended claims.
Additionally, be aware that all values are approximate and are given for description.
This application cites patents, patent applications, publications, product descriptions, and protocols, the descriptions of which are incorporated herein by reference in their entirety, for all purposes.
Contents6
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Priority claims2
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Titles2
- English
- GENE DETECTION ASSAY FOR IMPROVING THE LIKELIHOOD OF AN EFFECTIVE RESPONSE TO AN ERBB ANTAGONIST CANCER THERAPY
- Polish
- Zastosowanie antagonisty ErbB, antagonista ErbB do zastosowania w metodzie leczenia raka i sposób identyfikacji pacjenta skłonnego do korzystnej odpowiedzi na antagonistę ErbB przy leczeniu raka
Classification
- CPC, 22
- A61K39/39558
- A61K38/00
- C07K16/32
- C12Q1/6841
- C12Q2600/106
- G01N33/5023
- A61K31/337
- C12Q1/6886
- A61P15/00
- A61P15/14
- A61P35/00
- A61P35/02
- A61P37/04
- A61P43/00
- G01N33/57515
- A61K31/335
- A61K48/00
- A61K2300/00
- C07K16/2863
- C07K16/40
- C07K2317/24
- C12Q2600/158
- IPC, 10
- A61K39 395
- A61K31 337
- A61K45 00
- A61K31 355
- A61K38 00
- A61P35 00
- A61P43 00
- C07K16 32
- C12Q1 6841
- C12Q1 6886