Nova Patents
IL283072A

Modulators of irf5 expression

Abstract

This record has no abstract on file.

IL283072A, drawing sheet 1
Sheet 1 of 13

Term

No projected expiry on record.

  1. Priority
  2. Filed
  3. Published
  4. Today

59 claims: 36 independent, 23 dependent

  1. 1
    WHAT IS CLAIMED:1. A compound comprising a modified oligonucleotide 8 to 80 linked nucleosides in length having a nucleobase sequence comprising at least 8, at least 9, at least 10, at least 11, or at least 12 contiguous nucleobases of any of the nucleobase sequences of SEQ ID NO: 228, SEQ ID NOs: 37-227, and SEQ ID NOs: 229-1356.
  2. 2
    A compound comprising a modified oligonucleotide 8 to 80 nucleosides in length and having a nucleobase sequence comprising the nucleobase sequence of any one of SEQ ID NOs:37-1356.
  3. 3
    A compound comprising a modified oligonucleotide having a nucleobase sequence consisting of any one of SEQ ID NOs:37-1356.
  4. 4
    A compound comprising a modified oligonucleotide 8 to 80 linked nucleosides in length, wherein the modified oligonucleotide has a nucleobase sequence comprising a portion of at least 8 contiguous nucleobases 100% complementary to an equal length portion of nucleobases 4366-4381, 5141-5156, 51405160,5179-5194, 11544-11559, 11542-11596, 11736-11751, 11737-11752, 11720-11790, or 11794-11809 of SEQ ID NO:2, and wherein the nucleobase sequence of the modified oligonucleotide is at least 85%, at least 90%, at least 95%, or 100% complementary to SEQ ID NO: 2.
  5. 5
    A compound comprising a modified oligonucleotide 8 to 80 linked nucleosides in length, wherein the modified oligonucleotide has a nucleobase sequence complementary within nucleobases 55675642, 5644-5731, 5567-5731, 5567-5620, 13697-13733, 20553-20676, 20664-20824, 20553-20824, and 25844-25912 of SEQ ID NO:2, and wherein said modified oligonucleotide is at least 85%, at least 90%, at least 95%, or 100% complementary to SEQ ID NO: 2.
  6. 6
    A compound comprising a modified oligonucleotide 8 to 80 linked nucleosides in length, wherein the modified oligonucleotide has a nucleobase sequence comprising a portion of at least 8 contiguous nucleobases complementary to an equal length portion of nucleobases 5567-5642, 5644-5731, 5567-5731, 5567-5620, 13697-13733, 20553-20676, 20664-20824, 20553-20824, and 25844-25912 of a IRF5 nucleic acid having the nucleobase sequence of SEQ ID NO:2, wherein the nucleobase sequence of the modified oligonucleotide is complementary to SEQ ID NO: 2.
  7. 7
    A compound comprising a modified oligonucleotide 8 to 80 linked nucleosides in length, wherein the modified oligonucleotide has a nucleobase sequence comprising a 16 nucleobase portion complementary to an equal length portion of nucleobases 5567-5642, 5644-5731, 5567-5731, 5567-5620, 13697-13733, 20553-20676, 20664-20824, 20553-20824, and 25844-25912 of SEQ ID NO:2.
  8. 8
    A compound comprising a modified oligonucleotide 8 to 80 linked nucleosides in length, wherein the modified oligonucleotide has a nucleobase sequence comprising any one of SEQ ID NOs:168, 228, 717, 1340, 1270, 1272,and 1294.
  9. 9
    A compound comprising a modified oligonucleotide having a nucleobase sequence consisting of any one of SEQ ID NO:168, 228, 717, 1340, 1270, 1272, and 1294.
  10. 10
    Hie compound of any one of claims 1-9, wherein the oligonucleotide is at least 80%, at least 85%, at least 90%, at least 95% or 100% complementary to SEQ ID NO:2 over the entire length of the oligonucleotide.
  11. 11
    Hie compound of any one of claims 1-10, wherein the modified oligonucleotide comprises at least one modification selected from at least one modified intemucleoside linkage, at least one modified sugar, and at least one modified nucleobase.
  12. 16
    Hie compound of any one of claims 11-15, wherein the modified nucleobase is a 5- methylcytosine.
  13. 17
    Hie compound of any one of claims 1-16, wherein the modified oligonucleotide comprises:a gap segment consisting of linked deoxynucleosides;a 5’ wing segment consisting of linked nucleosides;and a 3’ wing segment consisting of linked nucleosides;wherein the gap segment is positioned immediately adjacent to and between the 5’ wing segment and the 3’ wing segment and wherein each nucleoside of each wing segment comprises a modified sugar.
  14. 18
    Hie compound of any one of claims 1-17, wherein the compound is single-stranded.
  15. 19
    Hie compound of any one of claims 1-17, wherein the compound is double-stranded.
  16. 20
    Hie compound of any one of claims 1-19, wherein the compound comprises ribonucleotides.
  17. 21
    Hie compound of any one of claims 1-19, wherein the compound comprises deoxy ribonucleotides.
  18. 22
    Hie compound of any one of claims 1-21, wherein the modified oligonucleotide consists of 10 to 30 linked nucleosides.
  19. 23
    Hie compound of any one of claims 1-21, wherein the modified oligonucleotide consists of 12 to 30 linked nucleosides.
  20. 24
    The compound of any one of claims 1-21, wherein the modified oligonucleotide consists of 15 to 30 linked nucleosides.
  21. 25
    A compound comprising a modified oligonucleotide 16 linked nucleosides in length, wherein the modified oligonucleotide has a nucleobase sequence comprising any one of SEQ ID NOs:168, 228, 717, 1340, 1270, 1272, and 1294, wherein the modified oligonucleotide comprises: a gap segment consisting of linked deoxynucleosides;a 5’ wing segment consisting of linked nucleosides;and a 3’ wing segment consisting of linked nucleosides;wherein the gap segment is positioned between the 5’ wing segment and the 3’ wing segment and wherein each nucleoside of each wing segment comprises a modified sugar.
  22. 26
    A compound comprising or consisting of a modified oligonucleotide 12-30 linked nucleobases in length having a nucleobase sequence comprising the sequence recited in any one of SEQ ID NOs:228, 168, 1270, 1272, and 1294, wherein the modified oligonucleotide comprises a gap segment consisting of ten linked deoxynucleosides;a 5’ wing segment consisting of three linked nucleosides;and a 3’ wing segment consisting of three linked nucleosides;wherein the gap segment is positioned between the 5 ’ wing segment and the 3 ’ wing segment, wherein each nucleoside of each wing segment comprises a cEt sugar;wherein each intemucleoside linkage is a phosphorothioate linkage and wherein each cytosine is a 5-methylcytosine. In certain embodiments, the modified oligonucleotide consists of 16-30 linked nucleosides. In certain embodiments, the modified oligonucleotide consists of 16 linked nucleosides.
  23. 27
    A compound consisting of a modified oligonucleotide 16 linked nucleobases in length having a nucleobase sequence consists of the sequence recited in SEQ ID NO:228, wherein the modified oligonucleotide comprises a gap segment consisting of ten linked deoxynucleosides;a 5’ wing segment consisting of three linked nucleosides;and a 3’ wing segment consisting of three linked nucleosides;wherein the gap segment is positioned between the 5 ’ wing segment and the 3 ’ wing segment, wherein each nucleoside of each wing segment comprises a cEt sugar;wherein each intemucleoside linkage is a phosphorothioate linkage and wherein each cytosine is a 5-methylcytosine.
  24. 28
    A compound comprising or consisting of a modified oligonucleotide 12-30 linked nucleobases in length having a nucleobase sequence comprising the sequence recited in any one of SEQ ID NOs:717, wherein the modified oligonucleotide comprises a gap segment consisting of ten linked deoxynucleosides;a 5’ wing segment consisting of two linked nucleosides;and a 3’ wing segment consisting of four linked nucleosides;wherein the gap segment is positioned between the 5 ’ wing segment and the 3 ’ wing segment, wherein each of the nucleosides in the 5’ wing segment comprises a cEt sugar (kk);wherein the nucleosides of the 3’ wing segment comprise from 5’ to 3’ direction of a cEt sugar, a 2’-MOE sugar, a cEt sugar, and a 2’-MOE sugar (keke);wherein each intemucleoside linkage is a phosphorothioate linkage and wherein each cytosine is a 5-methylcytosine. In certain embodiments, the modified oligonucleotide consists of 16-30 linked nucleosides. In certain embodiments, the modified oligonucleotide consists of 16 linked nucleosides.
  25. 29
    A compound comprising or consisting of a modified oligonucleotide 12-30 linked nucleobases in length having a nucleobase sequence comprising the sequence recited in any one of SEQ ID NOs:717 and 1340, wherein the modified oligonucleotide comprises a gap segment consisting of nine linked deoxynucleosides;a 5’ wing segment consisting of two linked nucleosides;and a 3’ wing segment consisting of five linked nucleosides;wherein the gap segment is positioned between the 5’ wing segment and the 3’ wing segment, wherein each of the nucleosides in the 5’ wing segment comprises a cEt sugar (kk);wherein the nucleosides of the 3’ wing segment from 5’ to 3’ direction comprise a 2’-MOE sugar, a 2’-MOE sugar, a 2’-MOE sugar, a cEt sugar and a cEt sugar (eeekk);wherein each intemucleoside linkage is a phosphorothioate linkage and wherein each cytosine is a 5-methylcytosine. In certain embodiments, the modified oligonucleotide consists of 16-30 linked nucleosides. In certain embodiments, the modified oligonucleotide consists of 16 linked nucleosides.
  26. 30
    A compound having the following formula or salt thereof:
  27. 31
    A compound having the following formula:
  28. 32
    A compound or modified oligonucleotide of any of claims 1-30, wherein the compound of modified oligonucleotide is in a pharmaceutically acceptable salt form.
  29. 35
    A composition comprising the compound or modified oligonucleotide of any one of claims 134 and a pharmaceutically acceptable carrier.
  30. 36
    A composition comprising a compound or modified oligonucleotide of any preceding claim, for use in therapy.
  31. 37
    A method of treating, preventing, or ameliorating a disease associated with IRF5 in an individual comprising administering to the individual a compound targeted to IRF5, thereby treating, preventing, or ameliorating the disease.
  32. 43
    The method of any of claims 38-42, wherein administering the compound inhibits or reduces inflammation in the gastrointestinal tract, diarrhea, pain, fatigue, abdominal cramping, blood in the stool, intestinal inflammation, disruption of the epithelial barrier of the gastrointestinal tract, dysbiosis, increased bowel frequency, tenesmus or painful spasms of the anal sphincter, constipation, or unintended weight loss in the individual.
  33. 44
    A method of inhibiting expression of IRF5 in a cell comprising contacting the cell with a compound targeted to IRF5, thereby inhibiting expression of IRF5 in the cell.
  34. 47
    A method of reducing or inhibiting reduces inflammation in the gastrointestinal tract, diarrhea, pain, fatigue, abdominal cramping, blood in the stool, intestinal inflammation, disruption of the epithelial barrier of the gastrointestinal tract, dysbiosis, increased bowel frequency, tenesmus or painful spasms of the anal sphincter, constipation, or unintended weight loss in an individual, comprising administering a compound targeted to IRF5 to the individual, thereby reducing or inhibiting reduces inflammation in the gastrointestinal tract, diarrhea, pain, fatigue, abdominal cramping, blood in the stool, intestinal inflammation, disruption of the epithelial barrier of the gastrointestinal tract, dysbiosis, increased bowel frequency, tenesmus or painful spasms of the anal sphincter, constipation, or unintended weight loss in the individual.
  35. 49
    The method of any one of claims 47-51, wherein the compound is an antisense compound targeted to IRF5.
  36. 52
    Use of a compound targeted to IRF5 for treating, preventing, or ameliorating a disease associated with IRF5.
  37. 56
    Use of a compound targeted to IRF5 in the manufacture of a medicament for treating, preventing, or ameliorating a disease associated with IRF5.
Independent claims37