IL280920A

Single-chain and multi-chain chimeric polypeptides and uses thereof

Abstract

This record has no abstract on file.

IL280920A, drawing sheet 1
Sheet 1 of 122

Term

No projected expiry on record.

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70 claims: 48 independent, 22 dependent

  1. 1
    A method of promoting the activation and proliferation of a natural killer cell or a T cell, the method comprising:contacting a natural killer cell or a T cell in a liquid culture medium comprising an effective amount of (i) a single-chain chimeric polypeptide comprising a first targetbinding domain, a linker domain, and a second target-binding domain, and (ii) an IgGl antibody construct that comprises at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for the activation and proliferation of the natural killer cell or the T cell, wherein the first target-binding domain and the second target-binding domain are each independently selected from the group consisting of: a soluble interleukin, soluble cytokine protein, or soluble cell surface protein, an antigen-binding domain, a soluble interleukin receptor, soluble cytokine receptor, or soluble cell surface receptor, and ligands of co-stimulatory molecules.
  2. 4
    The method of any one of claims 1-3, wherein the linker domain and the second target-binding domain directly abut each other.
  3. 5
    The method of any one of claims 1-3, wherein the single-chain chimeric polypeptide further comprises a linker sequence between the linker domain and the second target-binding domain.
  4. 6
    The method of any one of claims 1-5, wherein the single-chain chimeric polypeptide further comprises one or more additional target-binding domains.
  5. 7
    A kit comprising:(i) a single-chain chimeric polypeptide comprising a first target-binding domain, a linker domain, and a second target-binding domain, wherein the first target-binding domain and the second target-binding domain are each independently selected from the group consisting of: a soluble interleukin, soluble cytokine protein, or soluble cell surface protein, an antigen-binding domain, a soluble interleukin receptor, soluble cytokine receptor, or soluble cell surface receptor, and ligands of co-stimulatory molecules;and (ii) an IgGl antibody construct comprising at least one antigen-binding domain that binds specifically to the linker domain.
  6. 8
    A method of promoting the activation and proliferation of a natural killer cell or a T cell, the method comprising:contacting a natural killer cell or a T cell in a liquid culture medium comprising: (1) an effective amount of a multi-chain chimeric polypeptide comprising: (a) a first chimeric polypeptide comprising: (i) a first target-binding domain;(ii) a linker domain;and (iii) a first domain of a pair of affinity domains;(b) a second chimeric polypeptide comprising: (i) a second domain of a pair of affinity domains;and (ii) a second target-binding domain, wherein the first chimeric polypeptide and the second chimeric polypeptide associate through the binding of the first domain and the second domain of the pair of affinity domains;and (2) an effective amount of an IgGl antibody construct comprising at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for the activation and proliferation of the natural killer cell or the T cell.
  7. 11
    The method of any one of claims 8-10, wherein the linker domain and the first domain of the pair of affinity domains directly abut each other in the first chimeric polypeptide.
  8. 12
    The method of any one of claims 8-10, wherein the first chimeric polypeptide further comprises a linker sequence between the linker domain and the first domain of the pair of affinity domains in the first chimeric polypeptide.
  9. 13
    The method of any one of claims 8-12, wherein the second domain of the pair of affinity domains and the second target-binding domain directly abut each other in the second chimeric polypeptide.
  10. 14
    The method of any one of claims 8-12, wherein the second chimeric polypeptide further comprises a linker sequence between the second domain of the pair of affinity domains and the second target-binding domain in the second chimeric polypeptide.
  11. 15
    The method of any one of claims 1-6 and 8-14, wherein the first targetbinding domain and the second target-binding domain bind specifically to the same antigen.
  12. 16
    The method of any one of claims 1-6 and 8-14, wherein the first targetbinding domain and the second target-binding domain bind specifically to different antigens.
  13. 17
    The method of any one of claims 1-6 and 8-16, wherein one or both of the first target-binding domain and the second target-binding domain is an antigen-binding domain.
  14. 18
    The method of any one of claims 1-6 and 8-17, wherein one or both of the first target-binding domain and the second target-binding domain bind specifically to a target selected from the group consisting of:CD16a, CD28, CD3, CD33, CD20, CD19, CD22, CD123, IL-1R, IL-1, VEGF, IL-6R, IL-4, IL-10, PDL-1, TIGIT, PD-1, TIM3, CTLA4, MICA, MICB, IL-6, IL-8, TNFa, CD26a, CD36, ULBP2, CD30, CD200, CD80, CD86, PD-L2, B7-H4, HVEM, ILT3, ILT4, TIGIT, MHCII, LAG3, CD272, VISTA, CD137, CD40, CD47, CD70, 0X40, IGF-1R, MUC4AC, MUC5AC, Trop-2, CMET, EGFR, HER1, HER2, HER3, PSMA, CEA, B7H3, EPC AM, BCMA, P-cadherin, CEACAM5, a UL16-binding protein, HLA-DR, DLL4, TYRO3, AXL, MER, CD122, CD155, PDGF-DD, a ligand of TGF-β receptor II (TGF^RII), a ligand of TGF^RIII, a ligand of DNAM-1, a ligand of NKp46, a ligand of NKp44, a ligand of NKG2D, a ligand of NKp30, a ligand for a scMHCI, a ligand for a scMHCII, a ligand for a scTCR, a receptor for IL-1, a receptor for IL-2, a receptor for IL-3, a receptor for IL-7, a receptor for IL-8, a receptor for IL-10, a receptor for IL-12, a receptor for IL-15, a receptor for IL17, a receptor for IL-18, a receptor for IL-21, a receptor for PDGF-DD, a receptor for stem cell factor (SCF), a receptor for stem cell-like tyrosine kinase 3 ligand (FLT3L), a receptor for MICA, a receptor for MICB, a receptor for a ULP16-binding protein, a receptor for CD155, a receptor for CD122, and a receptor for CD28.
  15. 19
    The method of any one of claims 1-6 and 8-16, wherein one or both of the first target-binding domain and the second target-binding domain is a soluble interleukin, soluble cytokine protein, or soluble cell surface protein.
  16. 21
    The method of any one of claims 1-6 and 8-16, wherein one or both of the first target-binding domain and the second target-binding domain is a soluble interleukin receptor, soluble cytokine receptor, or soluble cell surface receptor.
  17. 23
    The method of any one of claims 8-14, wherein the first chimeric polypeptide further comprises one or more additional target-binding domain(s).
  18. 24
    The method of any one of claims 8-14, wherein the second chimeric polypeptide further comprises one or more additional target-binding domain(s).
  19. 25
    The method of any one of claims 1-6 and 8-24, wherein the linker domain is a soluble tissue factor domain.
  20. 28
    The method of any one of claims 1-6 and 8-27, wherein the IgGl antibody construct comprises at least one antigen-binding domain that binds specifically to the soluble tissue factor domain.
  21. 29
    The method of any one of claims 1-6 and 8-28, wherein the contacting step is performed for a period of about 2 hours to about 20 days.
  22. 30
    The method of any one of claims 1-6 and 8-29, wherein the liquid culture medium comprises the multi-chain chimeric polypeptide and the IgGl antibody construct at a molar ratio of about 0.5:1 to about 2:1.
  23. 31
    The method of any one of claims 1-6 and 8-30, wherein the NK cell or T cell has previously been genetically modified to express a chimeric antigen receptor or a recombinant T-cell receptor.
  24. 32
    The method of any one of claims 1-6 and 8-30, wherein the method further comprises, after the contacting step, introducing into the NK cell or the T cell a nucleic acid encoding a chimeric antigen-receptor or a recombinant T-cell receptor.
  25. 33
    The method of any one of claims 1-6 and 8-32, wherein the method further comprises, after the contacting step, administering the NK cell or the T cell to a subject in need thereof.
  26. 34
    The method of any one of claims 1-6 and 8-33, wherein one or both of the first target-binding domain and the second target-binding domain is a ligand of a costimulatory molecule.
  27. 36
    An activated NK cell or T cell produced by the method of any one of claims 1-6 and 8-35.
  28. 41
    A kit comprising:(1) a multi-chain chimeric polypeptide comprising: (a) a first chimeric polypeptide comprising: (i) a first target-binding domain;(ii) a linker domain;and (iii) a first domain of a pair of affinity domains;(b) a second chimeric polypeptide comprising: (i) a second domain of a pair of affinity domains;and (ii) a second target-binding domain, wherein the first chimeric polypeptide and the second chimeric polypeptide associate through the binding of the first domain and the second domain of the pair of affinity domains;and (2) an effective amount of an IgGl antibody that comprises at least one antigen-binding domain that binds specifically to the linker domain.
  29. 42
    A method of increasing the glucose consumption of an immune cell, the method comprising:contacting an immune cell in a liquid culture medium comprising an effective amount of (i) a single-chain chimeric polypeptide comprising a first target-binding domain, a linker domain, and a second target-binding domain, and optionally (ii) an IgGl antibody construct that comprises at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for glucose consumption in the immune cell, wherein the first target-binding domain and the second target-binding domain are each independently selected from the group consisting of: a soluble interleukin or cytokine protein, an antigen-binding domain, a soluble interleukin or cytokine receptor, and ligands of co-stimulatory molecules.
  30. 43
    A method of increasing the oxidative phosphorylation of an immune cell, the method comprising:contacting an immune cell in a liquid culture medium comprising an effective amount of (i) a single-chain chimeric polypeptide comprising a first target-binding domain, a linker domain, and a second target-binding domain, and optionally (ii) an IgGl antibody construct that comprises at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for oxidative phosphorylation in the immune cell, wherein the first target-binding domain and the second target-binding domain are each independently selected from the group consisting of: a soluble interleukin or cytokine protein, an antigen-binding domain, a soluble interleukin or cytokine receptor, and ligands of co-stimulatory molecules.
  31. 44
    A method of increasing the aerobic glycolysis of an immune cell, the method comprising:contacting an immune cell in a liquid culture medium comprising an effective amount of (i) a single-chain chimeric polypeptide comprising a first target-binding domain, a linker domain, and a second target-binding domain, and optionally (ii) an IgGl antibody construct that comprises at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for aerobic glycolysis in the immune cell, wherein the first target-binding domain and the second target-binding domain are each independently selected from the group consisting of: a soluble interleukin or cytokine protein, an antigen-binding domain, a soluble interleukin or cytokine receptor, and ligands of co-stimulatory molecules.
  32. 45
    A method of increasing the extracellular acidification rate (ECAR) of an immune cell, the method comprising:contacting an immune cell in a liquid culture medium comprising an effective amount of (i) a single-chain chimeric polypeptide comprising a first target-binding domain, a linker domain, and a second target-binding domain, and optionally (ii) an IgGl antibody construct that comprises at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for extracellular acidification by the immune cell, wherein the first target-binding domain and the second target-binding domain are each independently selected from the group consisting of: a soluble interleukin or cytokine protein, an antigen-binding domain, a soluble interleukin or cytokine receptor, and ligands of co-stimulatory molecules.
  33. 46
    A method of increasing the mitochondrial oxygen consumption rate of an immune cell, the method comprising:contacting an immune cell in a liquid culture medium comprising an effective amount of (i) a single-chain chimeric polypeptide comprising a first target-binding domain, a linker domain, and a second target-binding domain, and optionally (ii) an IgGl antibody construct that comprises at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for mitochondrial oxygen consumption rate by the immune cell, wherein the first target-binding domain and the second target-binding domain are each independently selected from the group consisting of: a soluble interleukin or cytokine protein, an antigen-binding domain, a soluble interleukin or cytokine receptor, and ligands of co-stimulatory molecules.
  34. 47
    A method of increasing the glucose consumption of an immune cell, the method comprising:contacting an immune cell in a liquid culture medium comprising (1) an effective amount of a multi-chain chimeric polypeptide comprising: (a) a first chimeric polypeptide comprising: (i) a first target-binding domain;(ii) a linker domain;and (iii) a first domain of a pair of affinity domains;(b) a second chimeric polypeptide comprising: (i) a second domain of a pair of affinity domains;and (ii) a second target-binding domain, wherein the first chimeric polypeptide and the second chimeric polypeptide associate through the binding of the first domain and the second domain of the pair of affinity domains;and (2) an effective amount of an IgGl antibody construct comprising at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for glucose consumption in the immune cell.
  35. 48
    A method of increasing the oxidative phosphorylation of an immune cell, the method comprising:contacting an immune cell in a liquid culture medium comprising (1) an effective amount of a multi-chain chimeric polypeptide comprising: (a) a first chimeric polypeptide comprising: (i) a first target-binding domain;(ii) a linker domain;and (iii) a first domain of a pair of affinity domains;(b) a second chimeric polypeptide comprising: (i) a second domain of a pair of affinity domains;and (ii) a second target-binding domain, wherein the first chimeric polypeptide and the second chimeric polypeptide associate through the binding of the first domain and the second domain of the pair of affinity domains;and (2) an effective amount of an IgGl antibody construct comprising at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for oxidative phosphorylation in the immune cell.
  36. 49
    A method of increasing the aerobic glycolysis of an immune cell, the method comprising:contacting an immune cell in a liquid culture medium comprising (1) an effective amount of a multi-chain chimeric polypeptide comprising: (a) a first chimeric polypeptide comprising: (i) a first target-binding domain;(ii) a linker domain;and (iii) a first domain of a pair of affinity domains;(b) a second chimeric polypeptide comprising: (i) a second domain of a pair of affinity domains;and (ii) a second target-binding domain, wherein the first chimeric polypeptide and the second chimeric polypeptide associate through the binding of the first domain and the second domain of the pair of affinity domains;and (2) an effective amount of an IgGl antibody construct comprising at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for aerobic glycolysis in the immune cell.
  37. 50
    A method of increasing the extracellular acidification rate (ECAR) of an immune cell, the method comprising:contacting an immune cell in a liquid culture medium comprising (1) an effective amount of a multi-chain chimeric polypeptide comprising: (a) a first chimeric polypeptide comprising: (i) a first target-binding domain;(ii) a linker domain;and (iii) a first domain of a pair of affinity domains;(b) a second chimeric polypeptide comprising: (i) a second domain of a pair of affinity domains;and (ii) a second target-binding domain, wherein the first chimeric polypeptide and the second chimeric polypeptide associate through the binding of the first domain and the second domain of the pair of affinity domains;and (2) an effective amount of an IgGl antibody construct comprising at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for extracellular acidification by the immune cell.
  38. 51
    A method of increasing the mitochondrial oxygen consumption rate of an immune cell, the method comprising:contacting an immune cell in a liquid culture medium comprising (1) an effective amount of a multi-chain chimeric polypeptide comprising: (a) a first chimeric polypeptide comprising: (i) a first target-binding domain;(ii) a linker domain;and (iii) a first domain of a pair of affinity domains;(b) a second chimeric polypeptide comprising: (i) a second domain of a pair of affinity domains;and (ii) a second target-binding domain, wherein the first chimeric polypeptide and the second chimeric polypeptide associate through the binding of the first domain and the second domain of the pair of affinity domains;and (2) an effective amount of an IgGl antibody construct comprising at least one antigen-binding domain that binds specifically to the linker domain, under conditions that allow for mitochondrial oxygen consumption rate by the immune cell.
  39. 52
    The method of any one of claims 42-51, wherein the method further comprises, after the contacting step, administering the NK cell or the T cell to a subject in need thereof.
  40. 53
    An activated immune cell produced by the method of any one of claims 42-51.
  41. 58
    The method of any one of claims 33, 39, 40, 52, 56, and 57, wherein the subject has been identified or diagnosed as having an age-related disease or condition, a cancer, or an infectious disease.
  42. 63
    The method of any one of claims 25, 26, and 28, wherein the soluble tissue factor domain comprises or consists of a sequence from a wildtype soluble human tissue factor.
  43. 64
    A method of inducing differentiation of an immune cell into a memory or memory-like immune cell, the method comprising contacting an immune cell in a liquid culture medium comprising:(1 ) an effective amount of a multi-chain chimeric polypeptide comprising: (a) a first chimeric polypeptide comprising: (i) a first target-binding domain;(ii) a linker domain;and (iii) a first domain of a pair of affinity domains;(b) a second chimeric polypeptide comprising: (i) a second domain of a pair of affinity domains;and (ii) a second target-binding domain, wherein the first chimeric polypeptide and the second chimeric polypeptide associate through the binding of the first domain and the second domain of the pair of affinity domains;and (2 ) an effective amount of an IgGl antibody construct comprising at least one antigen-binding domain that binds specifically to the linker domain.
  44. 65
    A method of inducing differentiation of an immune cell into a memory or memory-like immune cell, the method comprising contacting an immune cell in a liquid culture medium comprising an effective amount of (i) a single-chain chimeric polypeptide comprising a first target-binding domain, a linker domain, and a second target-binding domain, and (ii) an IgGl antibody construct that comprises at least one antigen-binding domain that binds specifically to the linker domain.
  45. 67
    The method of any one of claims 64-66, wherein the immune cell is selected from the group consisting of:an immature thymocyte, a periperhal blood Treg cell, a Th 17 cell, a Th22 cell, a Th9 cell, a Th2 cell, a Thl cell, a Th3 cell, λδ T cell, an αβ T cell, a tumor-infiltrating T cell, a CD8+ T cell, a CD 4+ T cell, a natural killer T cell, a mast cell, a macrophage, a neutrophil, a dendritic cell, a basophil, an eosinophil, and a natural killer cell.
  46. 68
    The method of any one of the claims 64-66, wherein the immune cell has previously been genetically modified to express a chimeric antigen receptor or a recombinant T-cell receptor.
  47. 69
    The method of any one of the claims 64-66, wherein the method further comprises, after the contacting step, introducing into the immune cell a nucleic acid encoding a chimeric antigen-recpetor or a recombinant T-cell receptor.
  48. 70
    The method of any one of claims 64-69, further comprising administering to the immune cell to a subject in need thereof.
Independent claims48