Nova Patents
IL201227A

Stitched polypeptides

Abstract

This record has no abstract on file.

Term

No projected expiry on record.

  1. Priority
  2. Filed
  3. Published
  4. Today

36 claims: 24 independent, 12 dependent

  1. 1
    201227/4 CLAIMS 1. A substantially alpha-helical polypeptide of the formula:Ra O Ra Rf-[Xa^Xa<, n 4 41 (Rc)x I x (Rc)x Rb (Rc)x (Rc)x O Ra Xaa^- N L2 L1 Ra O L2 M Rb 4 V(RC)x /K (Rc)x ' ''A, Re wherein: each instance of K, L1, L2, and M is, independently, cyclic or acyclic, branched or unbranched, substituted or unsubstituted C1-8alkylene;each instance of Ra is, independently, hydrogen;cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;cyclic or acyclic, substituted or unsubstituted acyl;or Ra is a suitable amino protecting group;each instance of Rb is, independently, a suitable amino acid side chain;hydrogen;cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;cyclic or acyclic, substituted or unsubstituted acyl;substituted or unsubstituted hydroxyl;substituted or unsubstituted thiol;substituted or unsubstituted amino;cyano;isocyano;halo;or nitro;each instance of Rc, is, independently, hydrogen;cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;cyclic or acyclic, substituted or unsubstituted acyl;substituted or unsubstituted hydroxyl;substituted or unsubstituted thiol;substituted or unsubstituted amino;cyano;isocyano;halo;or nitro;Re is -Re, -ORe, -N(RE)2, or -SRE, wherein each instance of RE is, independently, hydrogen, cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;226 201227/4 cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;substituted or unsubstituted acyl;a resin;a suitable hydroxyl, amino or thiol protecting group;or two RE groups together form a substituted or unsubstituted 5- to 6-membered heterocyclic or heteroaromatic ring;£ Rf is hydrogen, cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;substituted or unsubstituted acyl;a resin;a suitable amino protecting group;a label optionally joined by a linker, wherein the linker is selected from cyclic or acyclic, branched or unbranched, substituted or unsubstituted alkylene;cyclic or acyclic, branched or unbranched, substituted or unsubstituted alkenylene;cyclic or acyclic, branched or unbranched, substituted or unsubstituted alkynylene;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroalkylene;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroalkenylene;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroalkynylene;substituted or unsubstituted arylene;substituted or unsubstituted heteroarylene;or substituted or unsubstituted acylene;or Rf and Ra together form a substituted or unsubstituted 5- to 6-membered heterocyclic or heteroaromatic ring;each instance of XAA is, independently, a natural or unnatural amino acid;each instance of x is, independently, an integer between 0 to 3;y and z are, independently, an integer between 2 to 6;j is, independently, an integer between 1 to 10;p is an integer between 0 to 10;each instance of s and t is, independently, an integer between 0 and 100;and wherein..........corresponds to a double or triple bond.
  2. 2
    A substantially alpha-helical polypeptide selected from the formula:227 201227/4 ['Άγ-Re Ra O Ra R'-f XA^f Ν^^π XAA^· N Rb K L1 (RKL) OR XAA;N L2 (RLL)q XAA i N Ra O L2 M Rb : J. ' (Rc)x X*A7 b Re X AA Ra O Rf-[ XAA^ 'N^J^ Rb K L1 (Rc)* 'W XAA^· N O X Rb (RLM)u Re Re 228 201227/4 O (RLM)u X'A, Rb p O Ra XAA^- N L1 Ra O Ra O R4 x"'.· 4<· x"·' Rb K L, K L1 L2 (Rc) (Rc)x \ (Rc)x (Rc)x Re rM x AA (RKL) (Rc)x (Rc) and O Ra Xa^ n L2 L1 O L2 V Ra O Xaa^N M Rb b Re (RLM)u wherein: each instance of K, L1, L2, and M is, independently, cyclic or acyclic, branched or unbranched, substituted or unsubstituted C1-8alkylene;each instance of Ra is, independently, hydrogen;cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;cyclic or acyclic, substituted or unsubstituted acyl;or Ra is a suitable amino protecting group;each instance of Rb is, independently, a suitable amino acid side chain;hydrogen;cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;cyclic or acyclic, substituted or unsubstituted acyl;substituted or unsubstituted hydroxyl;substituted or unsubstituted thiol;substituted or unsubstituted amino;cyano;isocyano;halo;or nitro;each instance of Rc, is, independently, hydrogen;cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;cyclic or acyclic, branched or unbranched, 229 201227/4 substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;cyclic or acyclic, substituted or unsubstituted acyl;substituted or unsubstituted hydroxyl;substituted or unsubstituted thiol;substituted or unsubstituted amino;cyano;isocyano;halo;or nitro;each instance of Re is, independently, -RE, -ORE, -N(RE)2, or -SRE, wherein each instance of RE is, independently, hydrogen, cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;substituted or unsubstituted acyl;a resin;a suitable hydroxyl, amino, or thiol protecting group;or two RE groups together form a substituted or unsubstituted 5- to 6membered heterocyclic or heteroaromatic ring;each instance of Rf is, independently, hydrogen;cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;substituted or unsubstituted acyl;a resin;a suitable amino protecting group;a label optionally joined by a linker, wherein the linker is selected from cyclic or acyclic, branched or unbranched, substituted or unsubstituted alkylene;cyclic or acyclic, branched or unbranched, substituted or unsubstituted alkenylene;cyclic or acyclic, branched or unbranched, substituted or unsubstituted alkynylene;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroalkylene;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroalkenylene;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroalkynylene;substituted or unsubstituted arylene;substituted or unsubstituted heteroarylene;or substituted or unsubstituted acylene;or Rf and Ra together form a substituted or unsubstituted 5- to 6-membered heterocyclic or heteroaromatic ring;each instance of RKL, RLL, and RLM, is, independently, hydrogen;cyclic or acyclic, branched or unbranched, substituted or unsubstituted aliphatic;cyclic or acyclic, branched or unbranched, substituted or unsubstituted heteroaliphatic;substituted or unsubstituted aryl;substituted or unsubstituted heteroaryl;substituted or unsubstituted acyl;substituted or unsubstituted hydroxyl;substituted or unsubstituted thiol;substituted or unsubstituted amino;azido;cyano;isocyano;halo;nitro;or two adjacent RKL groups are joined to form a substituted or unsubstituted 5- to 8membered cycloaliphatic ring;substituted or unsubstituted 5- to 8- membered cycloheteroaliphatic ring;substituted or unsubstituted aryl ring;or substituted or unsubstituted heteroaryl ring;two adjacent RLL groups are joined to form a substituted or unsubstituted 5- to 230 201227/4 8- membered cycloaliphatic ring;substituted or unsubstituted 5- to 8- membered cycloheteroaliphatic ring;substituted or unsubstituted aryl ring;or substituted or unsubstituted heteroaryl ring;or two adjacent RLM groups are joined to form a substituted or unsubstituted 5-to 8- membered cycloaliphatic ring;substituted or unsubstituted 5- to 8- membered cycloheteroaliphatic ring;substituted or unsubstituted aryl ring;or substituted or unsubstituted heteroaryl ring;each instance of XAA is, independently, a natural or unnatural amino acid;each instance of x is, independently, an integer between 0 to 3;each instance of y and z is, independently, an integer between 2 to 6;each instance of j is, independently, an integer between 1 to 10;each instance of p is, independently, an integer between 0 to 10;each instance of s and t is, independently, an integer between 0 and 100;each instance of u, v, and q, is, independently, an integer between 0 to 4;and wherein: ..........corresponds to a double or triple bond;and ..........corresponds to a single, double, or triple bond.
  3. 5
    The polypeptide according to any one of claims 1-4, wherein Ra is hydrogen.
  4. 6
    The polypeptide according to any one of claims 1-5, wherein Rb is hydrogen or methyl.
  5. 7
    The polypeptide according to any one of claims 1-6, wherein each instance of L1 and L2 is, independently, cyclic or acyclic, branched or unbranched, substituted or unsubstituted C2-8alkylene. 231 201227/4
  6. 8
    The polypeptide according to any one of claims 1-7, wherein each instance of L1 and L2 is, independently, cyclic or acyclic, branched or unbranched, substituted or unsubstituted C3-7 alkylene.
  7. 9
    The polypeptide according to any one of claims 1-7, wherein each instance of L1 and L2 is, independently, a straight chain alkylene of 2 to 8 carbon atoms.
  8. 10
    The polypeptide according to any one of claims 1-9, wherein each instance of L1 and L2 is, independently, a straight chain alkylene of 3 to 7 carbon atoms.
  9. 11
    The polypeptide as claimed in any one of claims 1-10, wherein L1 and L2 are both -CH2CH2CH2-, -CH2CH2CH2CH2-, -CH2CH2CH2CH2CH2-, or -CH2CH2CH2CH2CH2CH2-.
  10. 12
    The polypeptide according to any one of claims 1-11, wherein each instance of K and M is, independently, cyclic or acyclic, branched or unbranched, substituted or unsubstituted C1-7alkylene.
  11. 13
    The polypeptide according to any one of claims 1-12, wherein each instance of K and M is, independently, a straight chain alkylene of 1 to 7 carbon atoms.
  12. 14
    The polypeptide according to any one of claims 1-13, wherein y is 2;and z is 2, 3, 5, or 6.
  13. 15
    The polypeptide according to any one of claims 1-13, wherein y is 3;and z is 2, 3, 5, or 6.
  14. 16
    The polypeptide according to any one of claims 1-13, wherein y is 3;and z is 3.
  15. 17
    The polypeptide according to any one of claims 1-13, wherein y is 3;and z is 6.
  16. 18
    The polypeptide according to any one of claims 1-13, wherein y is 5;and z is 2, 3, or 6. 232 201227/4
  17. 19
    The polypeptide according to any one of claims 1-13, wherein y is 6;and z is 2, 3, or 5.
  18. 20
    The polypeptide according to any one of claims 1-13, wherein y is 6;and z is 3. 4?
  19. 21
    The polypeptide according to any one of claims 1-20, wherein Rf is a label optionally joined by a linker. 4?
  20. 22
    The polypeptide according to any one of claims 1-20, wherein Rf is a label joined by a heteroalkylene linker.
  21. 26
    A pharmaceutical composition comprising a substantially alpha-helical polypeptide of any one of claims 1-25, or its pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable carrier. 233 201227/4
  22. 27
    A polypeptide as claimed in any one of claims 1-25, or its pharmaceutically acceptable salt thereof, for use in the treatment of a disease, disorder, or condition in a subject.
  23. 28
    Use of a polypeptide as claimed in any one of claims 1-25 or a pharmaceutically acceptable salt thereof in the preparation of a medicament for the treatment of a disease, disorder or condition in a subject.
  24. 29
    An alpha-helical polypeptide comprising at least two crosslinks, each crosslink connecting a pair of α,α-disubstituted amino acids separated by 2, 3 or 6 amino acids, wherein the peptide has a helicity of 50% or greater as measured by circular dichroism at room temperature.
Independent claims24